BLASTN 2.2.24 [Aug-08-2010]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= DPGLEAN04466 (UTR included)
(1285 letters)
Database: est
9484 sequences; 8,280,457 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
BF14_2196_C1 254 3e-67
BF01022A2F11 72 2e-12
>BF14_2196_C1
Length = 1199
Score = 254 bits (128), Expect = 3e-67
Identities = 131/132 (99%)
Strand = Plus / Plus
Query: 650 gacaataaaccagctcttatcagagatggatggattccatcagaacgagggtgtgatagt 709
||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||
Sbjct: 91 gacaataaaccagctcttatcagagatggatggattccatcagaacgagggagtgatagt 150
Query: 710 gctgggcgccaccaacaggagagacgacctggaccaggccctgctgagacctggaagatt 769
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 151 gctgggcgccaccaacaggagagacgacctggaccaggccctgctgagacctggaagatt 210
Query: 770 cgatgtcgaagt 781
||||||||||||
Sbjct: 211 cgatgtcgaagt 222
>BF01022A2F11
Length = 738
Score = 71.9 bits (36), Expect = 2e-12
Identities = 42/44 (95%)
Strand = Plus / Minus
Query: 1164 atatatatatatatatatatatatgtatatatgtgtgtgtgtgt 1207
||||||||||||||||||||| || |||||||||||||||||||
Sbjct: 401 atatatatatatatatatataaatatatatatgtgtgtgtgtgt 358
Score = 67.9 bits (34), Expect = 4e-11
Identities = 43/46 (93%)
Strand = Plus / Minus
Query: 1164 atatatatatatatatatatatatgtatatatgtgtgtgtgtgttt 1209
||||||||||||||||||| |||| ||||| |||||||||||||||
Sbjct: 399 atatatatatatatatataaatatatatatgtgtgtgtgtgtgttt 354
Database: est
Posted date: Jul 14, 2011 2:25 PM
Number of letters in database: 8,280,457
Number of sequences in database: 9484
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.37 0.711 1.31
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Sequences: 9484
Number of Hits to DB: 173,548
Number of extensions: 12310
Number of successful extensions: 12310
Number of sequences better than 1.0e-10: 2
Number of HSP's gapped: 12307
Number of HSP's successfully gapped: 3
Length of query: 1285
Length of database: 8,280,457
Length adjustment: 17
Effective length of query: 1268
Effective length of database: 8,119,229
Effective search space: 10295182372
Effective search space used: 10295182372
X1: 11 (21.8 bits)
X2: 15 (29.7 bits)
X3: 50 (99.1 bits)
S1: 12 (24.3 bits)
S2: 34 (67.9 bits)