BLASTN 2.2.24 [Aug-08-2010]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= DPGLEAN04531 (UTR included)
(1004 letters)
Database: est
9484 sequences; 8,280,457 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
BF01019A1H08 103 5e-22
BF01056B2D01 84 5e-16
BF01044B1A07 84 5e-16
BF14_335_C2 82 2e-15
BF14_335_C4 76 1e-13
BF01048A1E04 72 2e-12
BF01014B2F02 70 7e-12
>BF01019A1H08
Length = 504
Score = 103 bits (52), Expect = 5e-22
Identities = 58/60 (96%)
Strand = Plus / Minus
Query: 573 aagctcctctccctgcaacgcgatggacccggcacccgcacggtgaatcaatggaatgct 632
||||||||||||||||||||||||||||||||||||||||||||||||| || |||||||
Sbjct: 438 aagctcctctccctgcaacgcgatggacccggcacccgcacggtgaatccattgaatgct 379
>BF01056B2D01
Length = 728
Score = 83.8 bits (42), Expect = 5e-16
Identities = 54/58 (93%)
Strand = Plus / Minus
Query: 573 aagctcctctccctgcaacgcgatggacccggcacccgcacggtgaatcaatggaatg 630
|||||||||||||||||| | ||||||||||||||||||||||||||| ||||||||
Sbjct: 150 aagctcctctccctgcaatgtgatggacccggcacccgcacggtgaattcatggaatg 93
>BF01044B1A07
Length = 806
Score = 83.8 bits (42), Expect = 5e-16
Identities = 57/62 (91%)
Strand = Plus / Minus
Query: 573 aagctcctctccctgcaacgcgatggacccggcacccgcacggtgaatcaatggaatgct 632
|||||||||||||||| |||||||||||||| ||||||||||||||||| || ||| |||
Sbjct: 501 aagctcctctccctgccacgcgatggacccgccacccgcacggtgaatccattgaacgct 442
Query: 633 ga 634
||
Sbjct: 441 ga 440
>BF14_335_C2
Length = 1827
Score = 81.8 bits (41), Expect = 2e-15
Identities = 47/49 (95%)
Strand = Plus / Minus
Query: 573 aagctcctctccctgcaacgcgatggacccggcacccgcacggtgaatc 621
|||||||||||||||||||||| |||||||||||||||||||||||||
Sbjct: 882 aagctcctctccctgcaacgcggcggacccggcacccgcacggtgaatc 834
>BF14_335_C4
Length = 1491
Score = 75.8 bits (38), Expect = 1e-13
Identities = 57/62 (91%), Gaps = 1/62 (1%)
Strand = Plus / Plus
Query: 573 aagctcctctccctgcaacgcgatggacccggcacccgcacggtgaatcaatggaatgct 632
|||||||||||| ||||||||||||| ||| ||| |||||||||||||| ||||||||||
Sbjct: 1291 aagctcctctcc-tgcaacgcgatggtccccgcaaccgcacggtgaatccatggaatgct 1349
Query: 633 ga 634
||
Sbjct: 1350 ga 1351
>BF01048A1E04
Length = 789
Score = 71.9 bits (36), Expect = 2e-12
Identities = 39/40 (97%)
Strand = Plus / Plus
Query: 589 aacgcgatggacccggcacccgcacggtgaatcaatggaa 628
||||||||||||||||||||||||||||||||| ||||||
Sbjct: 1 aacgcgatggacccggcacccgcacggtgaatccatggaa 40
>BF01014B2F02
Length = 623
Score = 69.9 bits (35), Expect = 7e-12
Identities = 56/62 (90%), Gaps = 2/62 (3%)
Strand = Plus / Minus
Query: 573 aagctcctctccctgcaacgcgatggacccggcacccgcacggtgaatcaatggaatgct 632
||||||||||||||||||||| |||||||||||||||||||||| ||| | |||||||
Sbjct: 591 aagctcctctccctgcaacgc--tggacccggcacccgcacggtgcatccactgaatgct 534
Query: 633 ga 634
||
Sbjct: 533 ga 532
Database: est
Posted date: Jul 14, 2011 2:25 PM
Number of letters in database: 8,280,457
Number of sequences in database: 9484
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.37 0.711 1.31
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Sequences: 9484
Number of Hits to DB: 124,127
Number of extensions: 2545
Number of successful extensions: 2545
Number of sequences better than 1.0e-10: 7
Number of HSP's gapped: 2543
Number of HSP's successfully gapped: 7
Length of query: 1004
Length of database: 8,280,457
Length adjustment: 17
Effective length of query: 987
Effective length of database: 8,119,229
Effective search space: 8013679023
Effective search space used: 8013679023
X1: 11 (21.8 bits)
X2: 15 (29.7 bits)
X3: 50 (99.1 bits)
S1: 12 (24.3 bits)
S2: 34 (67.9 bits)