BLASTN 2.2.24 [Aug-08-2010]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= DPGLEAN04556 (UTR included)
(1221 letters)
Database: est
9484 sequences; 8,280,457 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
BF14_1989_C1 1768 0.0
>BF14_1989_C1
Length = 941
Score = 1768 bits (892), Expect = 0.0
Identities = 932/945 (98%), Gaps = 4/945 (0%)
Strand = Plus / Plus
Query: 86 ctgtcgagtgttgacaaaaaaattgcctcttctgtgaaacctaaccaaaaccactcttta 145
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1 ctgtcgagtgttgacaaaaaaattgcctcttctgtgaaacctaaccaaaaccactcttta 60
Query: 146 aattgaatatctacctgaataaaattttaataaacgaaaatgttggacagtttatttgac 205
|||| ||||||||| |||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 61 aattaaatatctacttgaataaaattttaataaacgaaaatgttggacagtttatttgac 120
Query: 206 gatgtgaagcgcatgaataaaagacagtttatctaccaagttcttagctttggtatgata 265
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 121 gatgtgaagcgcatgaataaaagacagtttatctaccaagttcttagctttggtatgata 180
Query: 266 gtttcttcagctttgatgatatggaagggtttaatggttgtcactggtagcgagagccct 325
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 181 gtttcttcagctttgatgatatggaagggtttaatggttgtcactggtagcgagagccct 240
Query: 326 attgtggttgtgttatccggcagtatggagccagcttttcataggggcgaccttttattt 385
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 241 attgtggttgtgttatccggcagtatggagccagcttttcataggggcgaccttttattt 300
Query: 386 ttgactaactaccccgatgaacccgtccgtgttggagaaatcgtcgtcttcaaggtcgaa 445
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 301 ttgactaactaccccgatgaacccgtccgtgttggagaaatcgtcgtcttcaaggtcgaa 360
Query: 446 ggccgagacattcctattgtacacagagtgttaaagctacatgaaaagaataatggcact 505
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 361 ggccgagacattcctattgtacacagagtgttaaagctacatgaaaagaataatggcact 420
Query: 506 gttaaatttttaactaaaggtgataacaatagtgttgatgatcgaggcttatacgctcaa 565
||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||
Sbjct: 421 gttaaatttttaactaaaggtgataacaatagtgttgatgatcgaggcttatatgctcaa 480
Query: 566 gggcagctatggctgacaaagaaggatgtggtaggtcgtactagagggttcttaccatac 625
|||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 481 gggcagctatggctaacaaagaaggatgtggtaggtcgtactagagggttcttaccatac 540
Query: 626 gttggtatggttacaatatatatgaacgaatatcctaagtttaagtttgctgtattggcg 685
|||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||
Sbjct: 541 gttggtatggttacaatatataggaacgaatatcctaagtttaagtttgctgtattggcg 600
Query: 686 tgtttggcaatttatgtcctagtacatagagagtgaagccgagtctgatctgatgtgaaa 745
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 601 tgtttggcaatttatgtcctagtacatagagagtgaagccgagtctgatctgatgtgaaa 660
Query: 746 aggatctgtgtttgaaaagaacttgcatttttttcacatatttaagttcttatagagtta 805
|||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||
Sbjct: 661 aggatctgtgtttgaagtgaacttgcatttttttcacatatttaagttcttatagagtta 720
Query: 806 tcatctccaagcttaatttaattaaatttaaaatggcacgaaagaaaccaaatttcagaa 865
|||||||||||||||||||||| ||||||||||||||||||||||||||||||||||
Sbjct: 721 tcatctccaagcttaatttaat----tttaaaatggcacgaaagaaaccaaatttcagaa 776
Query: 866 ttaatattattatggtaacttgtattgtgaatttttctgtattatatttactttgtaaac 925
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 777 ttaatattattatggtaacttgtattgtgaatttttctgtattatatttactttgtaaac 836
Query: 926 aaattgtcacaaaatttcaatcgactttgtgctgtcatttcataaattcgcgacttctgt 985
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 837 aaattgtcacaaaatttcaatcgactttgtgctgtcatttcataaattcgcgacttctgt 896
Query: 986 atcaacaattccctgtttatataaaactttaaagcaaaacatgct 1030
||||||||||| ||||||||||||||||||||||||||| |||||
Sbjct: 897 atcaacaattctctgtttatataaaactttaaagcaaaatatgct 941
Database: est
Posted date: Jul 14, 2011 2:25 PM
Number of letters in database: 8,280,457
Number of sequences in database: 9484
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.37 0.711 1.31
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Sequences: 9484
Number of Hits to DB: 165,204
Number of extensions: 3200
Number of successful extensions: 3200
Number of sequences better than 1.0e-10: 1
Number of HSP's gapped: 3199
Number of HSP's successfully gapped: 1
Length of query: 1221
Length of database: 8,280,457
Length adjustment: 17
Effective length of query: 1204
Effective length of database: 8,119,229
Effective search space: 9775551716
Effective search space used: 9775551716
X1: 11 (21.8 bits)
X2: 15 (29.7 bits)
X3: 50 (99.1 bits)
S1: 12 (24.3 bits)
S2: 34 (67.9 bits)