BLASTN 2.2.24 [Aug-08-2010]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= DPGLEAN04558 (UTR included)
(3372 letters)
Database: est
9484 sequences; 8,280,457 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
BF01037B1G12 387 e-107
BF14_2955_C1 234 7e-61
BF01049B2H03 72 6e-12
BF01058A1C03 70 3e-11
>BF01037B1G12
Length = 691
Score = 387 bits (195), Expect = e-107
Identities = 218/227 (96%)
Strand = Plus / Plus
Query: 2913 cagatgcaagtgagtcagatccagtcgctgatgctgagtggggacgtgaacggcgccttc 2972
|||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||
Sbjct: 459 cagatgcaagtgagtcagatccagtcgctgatgctgagcggggacgtgaacggcgccttc 518
Query: 2973 cagctggcattgtccgcctccgacctgtcgctggtggtggcggcgtgccgggccgcggag 3032
|||||||| |||||||||||||||||||||||||||||||| |||||| |||||||||||
Sbjct: 519 cagctggcgttgtccgcctccgacctgtcgctggtggtggctgcgtgcagggccgcggag 578
Query: 3033 cccgcccgcgtcctgggcccgccctgccgcctcaagcagcacgtgctgctgtccctcgtg 3092
||||||||||||| ||||||||||||||||||||||||||||||||||||||||||
Sbjct: 579 cccgcccgcgtccnnnntccgccctgccgcctcaagcagcacgtgctgctgtccctcgtg 638
Query: 3093 cagcagctcgccgccgacatgaccaaggacacgcatctcaagcaccg 3139
|||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 639 cagcagctcgccgccgacatgaccaaggacacgcatctcaagcaccg 685
>BF14_2955_C1
Length = 1217
Score = 234 bits (118), Expect = 7e-61
Identities = 127/130 (97%)
Strand = Plus / Plus
Query: 3010 tggcggcgtgccgggccgcggagcccgcccgcgtcctgggcccgccctgccgcctcaagc 3069
|||| ||||||||||||||||||||||||||| ||||||||||||||||||| |||||||
Sbjct: 1 tggctgcgtgccgggccgcggagcccgcccgcttcctgggcccgccctgccgactcaagc 60
Query: 3070 agcacgtgctgctgtccctcgtgcagcagctcgccgccgacatgaccaaggacacgcatc 3129
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 61 agcacgtgctgctgtccctcgtgcagcagctcgccgccgacatgaccaaggacacgcatc 120
Query: 3130 tcaagcaccg 3139
||||||||||
Sbjct: 121 tcaagcaccg 130
>BF01049B2H03
Length = 832
Score = 71.9 bits (36), Expect = 6e-12
Identities = 36/36 (100%)
Strand = Plus / Minus
Query: 3220 gcgagtattcatttaaatgaaactaatatttttcgg 3255
||||||||||||||||||||||||||||||||||||
Sbjct: 334 gcgagtattcatttaaatgaaactaatatttttcgg 299
>BF01058A1C03
Length = 779
Score = 69.9 bits (35), Expect = 3e-11
Identities = 35/35 (100%)
Strand = Plus / Minus
Query: 3217 ttcgcgagtattcatttaaatgaaactaatatttt 3251
|||||||||||||||||||||||||||||||||||
Sbjct: 523 ttcgcgagtattcatttaaatgaaactaatatttt 489
Database: est
Posted date: Jul 14, 2011 2:25 PM
Number of letters in database: 8,280,457
Number of sequences in database: 9484
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.37 0.711 1.31
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Sequences: 9484
Number of Hits to DB: 302,731
Number of extensions: 7056
Number of successful extensions: 7056
Number of sequences better than 1.0e-10: 4
Number of HSP's gapped: 7056
Number of HSP's successfully gapped: 4
Length of query: 3372
Length of database: 8,280,457
Length adjustment: 18
Effective length of query: 3354
Effective length of database: 8,109,745
Effective search space: 27200084730
Effective search space used: 27200084730
X1: 11 (21.8 bits)
X2: 15 (29.7 bits)
X3: 50 (99.1 bits)
S1: 12 (24.3 bits)
S2: 34 (67.9 bits)