BLASTN 2.2.24 [Aug-08-2010]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= DPGLEAN04560 (UTR included)
(4756 letters)
Database: est
9484 sequences; 8,280,457 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
BF01034B1F07 1360 0.0
>BF01034B1F07
Length = 834
Score = 1360 bits (686), Expect = 0.0
Identities = 704/710 (99%)
Strand = Plus / Plus
Query: 4047 gcttcggaggcgacagctggtggtgacggaacgcgaggcgcctggctttcagaacactac 4106
||||||||||| ||||||||||||||||||| ||||||||||||||||||||||||||||
Sbjct: 1 gcttcggaggcaacagctggtggtgacggaaagcgaggcgcctggctttcagaacactac 60
Query: 4107 catgacggatatatagagggaagtacttcagtgttggcggtagtgtggactgcgaccata 4166
||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||
Sbjct: 61 catgacggatatatagagggaagtacttcagtgttggcggtagtgtggactgcaaccata 120
Query: 4167 atactcagcttgtatggcgcgttcatgctctatcgtggacttctaagatgcatcagaagc 4226
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 121 atactcagcttgtatggcgcgttcatgctctatcgtggacttctaagatgcatcagaagc 180
Query: 4227 agaaaaatgaagagcatcactaaagtgtaaacagctgaaaaatgtttgcattcagttgta 4286
||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||
Sbjct: 181 agaaaaatgaagagcatcactaaagtgtaaacagctgaaaaatatttgcattcagttgta 240
Query: 4287 aagagaaagtgtttcagagttatcttggattagacttggattatgttacattctccaatt 4346
||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 241 aagagaaagtgtttcggagttatcttggattagacttggattatgttacattctccaatt 300
Query: 4347 tgacattccattgttgtttcgtttctgttgttttgttgtcgctgttgtttgatgattaag 4406
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 301 tgacattccattgttgtttcgtttctgttgttttgttgtcgctgttgtttgatgattaag 360
Query: 4407 tttcgtttccacgtgtttagcgatgtgtgacatcaattataataaaagtttctgctcatt 4466
||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 361 ttttgtttccacgtgtttagcgatgtgtgacatcaattataataaaagtttctgctcatt 420
Query: 4467 tatcgttccttcttatataattgaatctgtaaccgtatcatatcatagtattaactatcg 4526
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 421 tatcgttccttcttatataattgaatctgtaaccgtatcatatcatagtattaactatcg 480
Query: 4527 taatcggtgttctagtacttcaacatcacagccagcaaacagtctgtccgcaagagtgct 4586
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 481 taatcggtgttctagtacttcaacatcacagccagcaaacagtctgtccgcaagagtgct 540
Query: 4587 tccatgtttttacgacgtatatgaaaatgctaatttagacgatttatatgtcaccgtaca 4646
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 541 tccatgtttttacgacgtatatgaaaatgctaatttagacgatttatatgtcaccgtaca 600
Query: 4647 tttagccatgatttgtacgggctttcggtttgacaatattaagagctgtagctacgaagg 4706
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 601 tttagccatgatttgtacgggctttcggtttgacaatattaagagctgtagctacgaagg 660
Query: 4707 tggcttaggagttgtcgtacttagcttagaattgagggtaaggttgcgtt 4756
||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 661 tggcttaggagttgtcgtacttagcttagaattgagggtaaggttgcgtt 710
Database: est
Posted date: Jul 14, 2011 2:25 PM
Number of letters in database: 8,280,457
Number of sequences in database: 9484
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.37 0.711 1.31
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Sequences: 9484
Number of Hits to DB: 376,640
Number of extensions: 13999
Number of successful extensions: 13999
Number of sequences better than 1.0e-10: 1
Number of HSP's gapped: 13999
Number of HSP's successfully gapped: 1
Length of query: 4756
Length of database: 8,280,457
Length adjustment: 18
Effective length of query: 4738
Effective length of database: 8,109,745
Effective search space: 38423971810
Effective search space used: 38423971810
X1: 11 (21.8 bits)
X2: 15 (29.7 bits)
X3: 50 (99.1 bits)
S1: 12 (24.3 bits)
S2: 35 (69.9 bits)