BLASTN 2.2.24 [Aug-08-2010]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= DPGLEAN04567 (UTR included)
(1816 letters)
Database: est
9484 sequences; 8,280,457 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
BF14_1823_C1 1909 0.0
>BF14_1823_C1
Length = 982
Score = 1909 bits (963), Expect = 0.0
Identities = 969/972 (99%)
Strand = Plus / Plus
Query: 374 aacacctccaaggaatttggataaacagaccaccatcacagttgatgacaagacctttac 433
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 11 aacacctccaaggaatttggataaacagaccaccatcacagttgatgacaagacctttac 70
Query: 434 tgttcatgctgacgatctggtaaaattatgtgatcttggccgaggagcttatggcattgt 493
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 71 tgttcatgctgacgatctggtaaaattatgtgatcttggccgaggagcttatggcattgt 130
Query: 494 ggagaagatgcaccacaaacccagtaacaccatcatggcagtcaagaggatcacagcttc 553
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 131 ggagaagatgcaccacaaacccagtaacaccatcatggcagtcaagaggatcacagcttc 190
Query: 554 attcaatagccaatcattagagttgaagcgtttgttaatggatctcgatgtgtccatgag 613
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 191 attcaatagccaatcattagagttgaagcgtttgttaatggatctcgatgtgtccatgag 250
Query: 614 ggccagtgcatgtccttacactgtacatttttatggtgccatgttcagagagggggatgt 673
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 251 ggccagtgcatgtccttacactgtacatttttatggtgccatgttcagagagggggatgt 310
Query: 674 ttggatctgtatggaggttatggatatgagccttgataagttctatacaaaggtatacaa 733
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 311 ttggatctgtatggaggttatggatatgagccttgataagttctatacaaaggtatacaa 370
Query: 734 gaacaataaaacaataacagagaatattcttgggaaaattgcattttcggttgtgagtgc 793
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 371 gaacaataaaacaataacagagaatattcttgggaaaattgcattttcggttgtgagtgc 430
Query: 794 actgcattacctctattcaaagctgagggttatacacagagatgtgaaaccttcaaatat 853
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 431 actgcattacctctattcaaagctgagggttatacacagagatgtgaaaccttcaaatat 490
Query: 854 attgataaataggaaaggggaggtcaaaatgtgtgattttgggatttcaggatatttagt 913
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 491 attgataaataggaaaggggaggtcaaaatgtgtgattttgggatttcaggatatttagt 550
Query: 914 agattcagtagctaagaccatagatgctggctgtaagccttacatggcacccgaaaggat 973
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 551 agattcagtagctaagaccatagatgctggctgtaagccttacatggcacccgaaaggat 610
Query: 974 tgatccaagcggtaatcctggacaatatgacatcagaagtgacgtatggtcccttggaat 1033
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 611 tgatccaagcggtaatcctggacaatatgacatcagaagtgacgtatggtcccttggaat 670
Query: 1034 atccatgatcgaacttgctacgggaaagtttccttacaacacctggggaacaccatttga 1093
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 671 atccatgatcgaacttgctacgggaaagtttccttacaacacctggggaacaccatttga 730
Query: 1094 acagctcaagcaagtcgtagaggatgatccaccaagtcttcctataggacagttctcacc 1153
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 731 acagctcaagcaagtcgtagaggatgatccaccaagtcttcctataggacagttctcacc 790
Query: 1154 cgagtttgaggacataatcacccaatgcctcaaaaaggattacaggcagagaccgaatta 1213
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 791 cgagtttgaggacataatcacccaatgcctcaaaaaggattacaggcagagaccgaatta 850
Query: 1214 tgacgcactgctttcacatcaattctgccaggaacacagcgagaaagaaacagacgtggc 1273
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 851 tgacgcactgctttcacatcaattctgccaggaacacagcgagaaagaaacagacgtggc 910
Query: 1274 ttcctttgtcaaggagatacttgatatacccgacgattcctagtaaacggtgtataccta 1333
|||||||||| | |||||||||||||||||||||||||||||||| ||||||||||||||
Sbjct: 911 ttcctttgtcnangagatacttgatatacccgacgattcctagtanacggtgtataccta 970
Query: 1334 cttacataccta 1345
||||||||||||
Sbjct: 971 cttacataccta 982
Database: est
Posted date: Jul 14, 2011 2:25 PM
Number of letters in database: 8,280,457
Number of sequences in database: 9484
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.37 0.711 1.31
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Sequences: 9484
Number of Hits to DB: 238,720
Number of extensions: 4499
Number of successful extensions: 4499
Number of sequences better than 1.0e-10: 1
Number of HSP's gapped: 4499
Number of HSP's successfully gapped: 1
Length of query: 1816
Length of database: 8,280,457
Length adjustment: 17
Effective length of query: 1799
Effective length of database: 8,119,229
Effective search space: 14606492971
Effective search space used: 14606492971
X1: 11 (21.8 bits)
X2: 15 (29.7 bits)
X3: 50 (99.1 bits)
S1: 12 (24.3 bits)
S2: 34 (67.9 bits)