BLASTN 2.2.24 [Aug-08-2010]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= DPGLEAN04593 (UTR included)
(1171 letters)
Database: est
9484 sequences; 8,280,457 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
BF01047B2H03 113 6e-25
BF14_335_C2 96 2e-19
BF01019A1H08 80 9e-15
BF01049B1F01 76 1e-13
BF14_335_C4 76 1e-13
>BF01047B2H03
Length = 758
Score = 113 bits (57), Expect = 6e-25
Identities = 127/150 (84%), Gaps = 4/150 (2%)
Strand = Plus / Minus
Query: 68 aaaaagaaataaccacaaacgagcgatcagtaggttttgcgaaagaaggcactagggcta 127
||||||||||||||||||||| ||||| | | ||||||| || ||||| || ||||||||
Sbjct: 212 aaaaagaaataaccacaaacgggcgattaattggttttgtgagagaagacattagggcta 153
Query: 128 taaaatcaaacgtcaagctttactctatccttaaagtggctccggtttggactataat-- 185
|||| |||||| |||||| ||||||||||||||||| || | ||| ||| ||||||||
Sbjct: 152 taaagtcaaacatcaagccttactctatccttaaagcggtttcggattgcactataatca 93
Query: 186 --gatacgtatgagcaacgatataaaatcc 213
|||||||||| | ||||||| |||||||
Sbjct: 92 tggatacgtatggggaacgatacaaaatcc 63
>BF14_335_C2
Length = 1827
Score = 95.6 bits (48), Expect = 2e-19
Identities = 134/162 (82%), Gaps = 3/162 (1%)
Strand = Plus / Minus
Query: 401 gagaggtataacagctaaatctcactacgacctactacaagactttggcctatcaagaac 460
||||||||||||||||||||||| |||| ||||||| || |||| ||||| || |||||
Sbjct: 1107 gagaggtataacagctaaatctctctacagcctactaaaatacttgggcctgtccagaac 1048
Query: 461 taacatgaattcattcttagaacgtatttcaaaggcagccatgatatgttcgttcctaat 520
||||| | ||||||||| ||||||| ||| ||| |||| | || ||||||| | |||
Sbjct: 1047 taacaccagttcattcttcgaacgtacttcgaagacagctctagtaggttcgtttcaaat 988
Query: 521 ctggttaggtaaagagaggagcttggatggtggatgtgagcg 562
|||||||| ||||||||||||||| |||||| |||||||
Sbjct: 987 ttggttagg---agagaggagcttggacggtggaggtgagcg 949
Score = 67.9 bits (34), Expect = 3e-11
Identities = 55/62 (88%)
Strand = Plus / Minus
Query: 570 cttaaacctacacctgggccgcaagtcccaagcacttttaaagctcctctcccggcaacg 629
|||||||||||||||| | ||||| ||||| ||||| || ||||||||||||| ||||||
Sbjct: 922 cttaaacctacacctgtgtcgcaaatcccaggcactgttgaagctcctctccctgcaacg 863
Query: 630 cg 631
||
Sbjct: 862 cg 861
>BF01019A1H08
Length = 504
Score = 79.8 bits (40), Expect = 9e-15
Identities = 58/64 (90%)
Strand = Plus / Minus
Query: 568 cccttaaacctacacctgggccgcaagtcccaagcacttttaaagctcctctcccggcaa 627
|||||||||||||||||||| ||||| ||||| ||||| || ||||||||||||| ||||
Sbjct: 480 cccttaaacctacacctgggtcgcaactcccaggcactgttgaagctcctctccctgcaa 421
Query: 628 cgcg 631
||||
Sbjct: 420 cgcg 417
>BF01049B1F01
Length = 840
Score = 75.8 bits (38), Expect = 1e-13
Identities = 56/62 (90%)
Strand = Plus / Minus
Query: 568 cccttaaacctacacctgggccgcaagtcccaagcacttttaaagctcctctcccggcaa 627
|||||| ||||||||||||| ||||||||||| ||||| || ||||||||||||| ||||
Sbjct: 648 cccttacacctacacctgggtcgcaagtcccaggcactgttgaagctcctctccctgcaa 589
Query: 628 cg 629
||
Sbjct: 588 cg 587
>BF14_335_C4
Length = 1491
Score = 75.8 bits (38), Expect = 1e-13
Identities = 50/54 (92%)
Strand = Plus / Plus
Query: 568 cccttaaacctacacctgggccgcaagtcccaagcacttttaaagctcctctcc 621
|||||||||||||||||||| ||||||||||| ||||| || ||||||||||||
Sbjct: 1249 cccttaaacctacacctgggtcgcaagtcccaggcactgttgaagctcctctcc 1302
Database: est
Posted date: Jul 14, 2011 2:25 PM
Number of letters in database: 8,280,457
Number of sequences in database: 9484
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.37 0.711 1.31
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Sequences: 9484
Number of Hits to DB: 136,718
Number of extensions: 2870
Number of successful extensions: 2870
Number of sequences better than 1.0e-10: 5
Number of HSP's gapped: 2869
Number of HSP's successfully gapped: 6
Length of query: 1171
Length of database: 8,280,457
Length adjustment: 17
Effective length of query: 1154
Effective length of database: 8,119,229
Effective search space: 9369590266
Effective search space used: 9369590266
X1: 11 (21.8 bits)
X2: 15 (29.7 bits)
X3: 50 (99.1 bits)
S1: 12 (24.3 bits)
S2: 34 (67.9 bits)