BLASTN 2.2.24 [Aug-08-2010]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= DPGLEAN04603 (UTR included)
(1990 letters)
Database: est
9484 sequences; 8,280,457 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
BF14_2195_C1 1475 0.0
>BF14_2195_C1
Length = 780
Score = 1475 bits (744), Expect = 0.0
Identities = 773/782 (98%), Gaps = 3/782 (0%)
Strand = Plus / Plus
Query: 408 tgataaaataccacctgtaacatgtttattatcttagcactagttttagtagcgagttca 467
||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||
Sbjct: 2 tgataaaataccacctgtaacatgtttat---cttagcactagttttagtagcgagttca 58
Query: 468 attccgccggaaaaccacgcattgacaacaaaaatgacaaaagatctaaaagttgtagtt 527
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 59 attccgccggaaaaccacgcattgacaacaaaaatgacaaaagatctaaaagttgtagtt 118
Query: 528 tcgtccaacgattatcccgcgagcgggttaaaagttcttcaggaacatttcacagtttta 587
||||| ||||||||||||||||||||||||||||| ||||||||||||||||||||||||
Sbjct: 119 tcgtcaaacgattatcccgcgagcgggttaaaagtccttcaggaacatttcacagtttta 178
Query: 588 caaagtaaatacaatcattacgggaaagagggtataacagagaaccaggaggaactcatg 647
|||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 179 caaagtaaatacaaccattacgggaaagagggtataacagagaaccaggaggaactcatg 238
Query: 648 aaaattattcctggagcgtcagccctggtgtggatctctcaccatcccatcaccaaggaa 707
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 239 aaaattattcctggagcgtcagccctggtgtggatctctcaccatcccatcaccaaggaa 298
Query: 708 ctgcttgatagagctggacctcagcttaaaatagtaagcacggtgtcagctgggtacaat 767
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 299 ctgcttgatagagctggacctcagcttaaaatagtaagcacggtgtcagctgggtacaat 358
Query: 768 cactgcaatgtcccggagctgaaggcgcgtggcattaaactttccaacacaccggaagtc 827
||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||
Sbjct: 359 cactgcaatgtcccggagctgaaggcgcgcggcattaaactttccaacacaccggaagtc 418
Query: 828 ctcagctcggccgtggcagagatcgctgtgtccctgatcttgggtgcagcgagacggttc 887
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 419 ctcagctcggccgtggcagagatcgctgtgtccctgatcttgggtgcagcgagacggttc 478
Query: 888 acagagaacctggatcaagtccgcagaggcgaatgggagatcggtttccaaaagactctc 947
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 479 acagagaacctggatcaagtccgcagaggcgaatgggagatcggtttccaaaagactctc 538
Query: 948 ggacaggacgtcagaggaagtactgtcggagttatagggctcggtggaattggacaggcg 1007
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 539 ggacaggacgtcagaggaagtactgtcggagttatagggctcggtggaattggacaggcg 598
Query: 1008 actgtgaagaggttggctggattcgaagtagagaggttcctttacaccggacaccgagaa 1067
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 599 actgtgaagaggttggctggattcgaagtagagaggttcctttacaccggacaccgagaa 658
Query: 1068 aaaccagaagcaaaagctcttaacgcggaattcgtatctctcgataatcttctgagccag 1127
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 659 aaaccagaagcaaaagctcttaacgcggaattcgtatctctcgataatcttctgagccag 718
Query: 1128 agcgactttatagtcctcgctgttccgttgaccgatgagacccgtcacatgataaacaaa 1187
||||||||||||||||||||||||||||||||||| ||||| ||||||||||||||||||
Sbjct: 719 agcgactttatagtcctcgctgttccgttgaccgacgagactcgtcacatgataaacaaa 778
Query: 1188 ac 1189
||
Sbjct: 779 ac 780
Database: est
Posted date: Jul 14, 2011 2:25 PM
Number of letters in database: 8,280,457
Number of sequences in database: 9484
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.37 0.711 1.31
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Sequences: 9484
Number of Hits to DB: 218,052
Number of extensions: 4380
Number of successful extensions: 4380
Number of sequences better than 1.0e-10: 1
Number of HSP's gapped: 4379
Number of HSP's successfully gapped: 1
Length of query: 1990
Length of database: 8,280,457
Length adjustment: 17
Effective length of query: 1973
Effective length of database: 8,119,229
Effective search space: 16019238817
Effective search space used: 16019238817
X1: 11 (21.8 bits)
X2: 15 (29.7 bits)
X3: 50 (99.1 bits)
S1: 12 (24.3 bits)
S2: 34 (67.9 bits)