BLASTN 2.2.24 [Aug-08-2010]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= DPGLEAN04607 (UTR included)
(1378 letters)
Database: est
9484 sequences; 8,280,457 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
BF14_1554_C1 1164 0.0
>BF14_1554_C1
Length = 654
Score = 1164 bits (587), Expect = 0.0
Identities = 626/638 (98%), Gaps = 2/638 (0%)
Strand = Plus / Plus
Query: 438 ttaaaccgaaactttgtttagattttataatttacttagcacagttatttctaaaaggaa 497
|||||||||||||||| |||||| |||||||||||||||||||||||||||||||||||
Sbjct: 1 ttaaaccgaaactttggttagatcctataatttacttagcacagttatttctaaaaggaa 60
Query: 498 aatatggtagacgatttaagaaaacacctcaatcatttgcttgagaaagtaaacggatta 557
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 61 aatatggtagacgatttaagaaaacacctcaatcatttgcttgagaaagtaaacggatta 120
Query: 558 cattgtattttaataaccgatcgtgatggagttcccgtagtgagatctgtgactgaaaaa 617
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 121 cattgtattttaataaccgatcgtgatggagttcccgtagtgagatctgtgactgaaaaa 180
Query: 618 gcaccgcaactggctcttaggcctaactttatatcaacttttggaatggcaacagatcaa 677
|||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 181 gcaccgcagctggctcttaggcctaactttatatcaacttttggaatggcaacagatcaa 240
Query: 678 gcaagtaagctgggtcttgggagaaataaaacgattatatcaatgtactcgagttatcaa 737
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 241 gcaagtaagctgggtcttgggagaaataaaacgattatatcaatgtactcgagttatcaa 300
Query: 738 gtcattcaaatgaataagcttccacttgtaataacattcattggtagtgataactgcaat 797
|| |||||||||||||||||||| ||||||||||||||||||||||||||||||||||||
Sbjct: 301 gtgattcaaatgaataagcttccccttgtaataacattcattggtagtgataactgcaat 360
Query: 798 acagggcatattttatctctggaaagtcaaatagaacctttccttaaggatctagaaggt 857
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 361 acagggcatattttatctctggaaagtcaaatagaacctttccttaaggatctagaaggt 420
Query: 858 atcgttgcagatgccccctgagttattatactacaatacacatattgtactatccttcat 917
||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||
Sbjct: 421 atcgttgcagatgccccttgagttattatactacaatacacatattgtactatccttcat 480
Query: 918 aaatatatccgacttgtaataattaccatcagcagcagataggtgttttgttttttaatt 977
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 481 aaatatatccgacttgtaataattaccatcagcagcagataggtgttttgttttttaatt 540
Query: 978 tagtgttatttaagtttataattcagaggtgccttttttcatagttcaattggtttattt 1037
|||||||||||||||||| |||||| |||||||||||||||||||| |||||||||||||
Sbjct: 541 tagtgttatttaagtttacaattcaaaggtgccttttttcatagtttaattggtttattt 600
Query: 1038 tgcatttttttttttaataatttgtttgtatccataaa 1075
|||| ||||||||||||||||||||||||||||||||
Sbjct: 601 tgca--tttttttttaataatttgtttgtatccataaa 636
Database: est
Posted date: Jul 14, 2011 2:25 PM
Number of letters in database: 8,280,457
Number of sequences in database: 9484
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.37 0.711 1.31
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Sequences: 9484
Number of Hits to DB: 255,247
Number of extensions: 7558
Number of successful extensions: 7558
Number of sequences better than 1.0e-10: 1
Number of HSP's gapped: 7557
Number of HSP's successfully gapped: 1
Length of query: 1378
Length of database: 8,280,457
Length adjustment: 17
Effective length of query: 1361
Effective length of database: 8,119,229
Effective search space: 11050270669
Effective search space used: 11050270669
X1: 11 (21.8 bits)
X2: 15 (29.7 bits)
X3: 50 (99.1 bits)
S1: 12 (24.3 bits)
S2: 34 (67.9 bits)