BLASTN 2.2.24 [Aug-08-2010]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= DPGLEAN04622 (UTR included)
(4621 letters)
Database: est
9484 sequences; 8,280,457 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
BF14_3524_C1 1618 0.0
>BF14_3524_C1
Length = 1091
Score = 1618 bits (816), Expect = 0.0
Identities = 831/836 (99%)
Strand = Plus / Plus
Query: 3382 cagaacatcacccagaaaccaaagatgacattaataagccgccctattctaaatttgtaa 3441
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 256 cagaacatcacccagaaaccaaagatgacattaataagccgccctattctaaatttgtaa 315
Query: 3442 ctgactatatgtctccattactagaaaatttggaatctattcaaagtccagcgaatactt 3501
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 316 ctgactatatgtctccattactagaaaatttggaatctattcaaagtccagcgaatactt 375
Query: 3502 ctggcctgatccaatccatgttggttttgagatggaaagcaaacaatagaaagactaatc 3561
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 376 ctggcctgatccaatccatgttggttttgagatggaaagcaaacaatagaaagactaatc 435
Query: 3562 gcagagtcgtcggccaacacagcatctggatggattgctttacgaaaacactatcaaggg 3621
||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||
Sbjct: 436 gcagagtcgtcggccaacacagcatatggatggattgctttacgaaaacactatcaaggg 495
Query: 3622 aaagagaaaaattgcccatcgaagtcacaagcggagtacaactcgacgatttagacagcg 3681
||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||
Sbjct: 496 aaagagaaaaattgcccatcgaagtcacaagcggagtacaactcgacgaattagacagcg 555
Query: 3682 ccacagatataaccgatgtgaagagtaaaaatgataataacgacctcgtcatcatcaaag 3741
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 556 ccacagatataaccgatgtgaagagtaaaaatgataataacgacctcgtcatcatcaaag 615
Query: 3742 tcgaacattccaatcacattaatcataacttcaaagcaaataaactatgcctgatacccg 3801
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 616 tcgaacattccaatcacattaatcataacttcaaagcaaataaactatgcctgatacccg 675
Query: 3802 tagtcttgaacatagtcaattgtcaaggatcaccggtaacagtttttattgatatgcata 3861
||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 676 tagtcttaaacatagtcaattgtcaaggatcaccggtaacagtttttattgatatgcata 735
Query: 3862 aacaacagaacagagattcttcgggagagattggatgggccggggccctaaataacggtt 3921
||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||
Sbjct: 736 aacaacagaacagagattcttcgggagagattggatgggccggggcccttaataacggtt 795
Query: 3922 tagatgcggattccaaagaattgggtgtgaacgtgactttggataagttcgagtcgagaa 3981
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 796 tagatgcggattccaaagaattgggtgtgaacgtgactttggataagttcgagtcgagaa 855
Query: 3982 gagttcaggttcgggctttgtgtgccgctccaggaacatatctggtgggtggtgcgttcc 4041
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 856 gagttcaggttcgggctttgtgtgccgctccaggaacatatctggtgggtggtgcgttcc 915
Query: 4042 acgtcactaccaaacacgaccaaatcctcaactcatactttcctaatacaacttcactgt 4101
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 916 acgtcactaccaaacacgaccaaatcctcaactcatactttcctaatacaacttcactgt 975
Query: 4102 tggtcgttaagcagatgtaacggcagagacacactggtgtctgaatttgttttaatagaa 4161
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 976 tggtcgttaagcagatgtaacggcagagacacactggtgtctgaatttgttttaatagaa 1035
Query: 4162 atctattccccttatacatttaatatggttggaagtacgttagtttattctcgttc 4217
||||||||||||||||||||||||||||||||||| ||||||||||||||||||||
Sbjct: 1036 atctattccccttatacatttaatatggttggaagcacgttagtttattctcgttc 1091
Database: est
Posted date: Jul 14, 2011 2:25 PM
Number of letters in database: 8,280,457
Number of sequences in database: 9484
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.37 0.711 1.31
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Sequences: 9484
Number of Hits to DB: 524,276
Number of extensions: 10032
Number of successful extensions: 10032
Number of sequences better than 1.0e-10: 1
Number of HSP's gapped: 10032
Number of HSP's successfully gapped: 1
Length of query: 4621
Length of database: 8,280,457
Length adjustment: 18
Effective length of query: 4603
Effective length of database: 8,109,745
Effective search space: 37329156235
Effective search space used: 37329156235
X1: 11 (21.8 bits)
X2: 15 (29.7 bits)
X3: 50 (99.1 bits)
S1: 12 (24.3 bits)
S2: 35 (69.9 bits)