BLASTN 2.2.24 [Aug-08-2010]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= DPGLEAN04639 (UTR included)
(3565 letters)
Database: est
9484 sequences; 8,280,457 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
BF01041B1A03 1477 0.0
BF01055B1D04 1453 0.0
BF01012B1H05 991 0.0
>BF01041B1A03
Length = 794
Score = 1477 bits (745), Expect = 0.0
Identities = 748/749 (99%)
Strand = Plus / Plus
Query: 467 agttgttcagtggttataattatttaaaaaaataatggatataactactactcaaaagtt 526
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 46 agttgttcagtggttataattatttaaaaaaataatggatataactactactcaaaagtt 105
Query: 527 tatagaacgtgggtcccatagaggaaagggactcgctgtgttcactagtggtggtgactc 586
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 106 tatagaacgtgggtcccatagaggaaagggactcgctgtgttcactagtggtggtgactc 165
Query: 587 ccaaggtatgaatgctgccgtacggtcagtcgttcggatgggaatttacttgggttgtaa 646
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 166 ccaaggtatgaatgctgccgtacggtcagtcgttcggatgggaatttacttgggttgtaa 225
Query: 647 agtttacttcatccgtgaaggctaccaaggtatggtagatggtggagacaacatagaaga 706
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 226 agtttacttcatccgtgaaggctaccaaggtatggtagatggtggagacaacatagaaga 285
Query: 707 agcaaattggtcatctgttagttctattattcacaaaggtggtacaattattggatctgc 766
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 286 agcaaattggtcatctgttagttctattattcacaaaggtggtacaattattggatctgc 345
Query: 767 tagatgtatggatttcatgaaaagggaaggtcgtcttaaggctgcaagcaacctggtcac 826
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 346 tagatgtatggatttcatgaaaagggaaggtcgtcttaaggctgcaagcaacctggtcac 405
Query: 827 tcgaggtataactaatttggtggtaattggtggtgatggttcactcactggagctaacct 886
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 406 tcgaggtataactaatttggtggtaattggtggtgatggttcactcactggagctaacct 465
Query: 887 tttccgtcaggaatggtctagcttgcttgatgaattattagaaaataatagaattactaa 946
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 466 tttccgtcaggaatggtctagcttgcttgatgaattattagaaaataatagaattactaa 525
Query: 947 agaccaaagagaaaagtataaacatttgcatattgctggaatggtgggttcaattgacaa 1006
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 526 agaccaaagagaaaagtataaacatttgcatattgctggaatggtgggttcaattgacaa 585
Query: 1007 tgatttttgtggtaccgacatgacaattggcacagattcagcattgcatcgcattattga 1066
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 586 tgatttttgtggtaccgacatgacaattggcacagattcagcattgcatcgcattattga 645
Query: 1067 agctattgatgctattgtaagcactgcttactctcaccagaggacattcattatggaagt 1126
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 646 agctattgatgctattgtaagcactgcttactctcaccagaggacattcattatggaagt 705
Query: 1127 catgggtagacattgtggatatcttgctgtggtaacagcattgtcttctgaggctgatta 1186
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 706 catgggtagacattgtggatatcttgctgtggtaacagcattgtcttctgaggctgatta 765
Query: 1187 tgtgtttatacccgaatcaccacctacag 1215
||||||||||||||||||||| |||||||
Sbjct: 766 tgtgtttatacccgaatcaccccctacag 794
Score = 93.7 bits (47), Expect = 2e-18
Identities = 47/47 (100%)
Strand = Plus / Plus
Query: 338 taaaaacataaattcacttcaaaacatttatttatcgtattataaag 384
|||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1 taaaaacataaattcacttcaaaacatttatttatcgtattataaag 47
>BF01055B1D04
Length = 765
Score = 1453 bits (733), Expect = 0.0
Identities = 761/768 (99%), Gaps = 3/768 (0%)
Strand = Plus / Plus
Query: 2525 ttacatctacgaagaaaagttctccattaaggatctgcaacaggatgtatatcacatggc 2584
||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1 ttacatctacgaa--aaagttctccattaaggatctgcaacaggatgtatatcacatggc 58
Query: 2585 gtccaaaatgaccggcggcatccaacgcggtctcatactccgtaacgagaaggccaacga 2644
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 59 gtccaaaatgaccggcggcatccaacgcggtctcatactccgtaacgagaaggccaacga 118
Query: 2645 taattataacactgagtttatttatagactctattctgaagaggggaaaggtttatttac 2704
|||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||
Sbjct: 119 taattataacactgagttcatttatagactctattctgaagaggggaaaggtttatttac 178
Query: 2705 agcgagaatgaacgtgctcggtcacatgcagcaaggaggttcgccaactcccttcgatag 2764
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 179 agcgagaatgaacgtgctcggtcacatgcagcaaggaggttcgccaactcccttcgatag 238
Query: 2765 gaacatgggtaccaaaatggcggccaagtctctccattggctggttgagaatattcaacg 2824
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 239 gaacatgggtaccaaaatggcggccaagtctctccattggctggttgagaatattcaacg 298
Query: 2825 cggcaacaccggacccgattctgcctgtttactcggcgttgtgaagagacaatacaaatt 2884
|||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||
Sbjct: 299 cggcaacaccggacccgactctgcctgtttactcggcgttgtgaagagacaatacaaatt 358
Query: 2885 cacaccgctcgaggagctcaaagctcagactaatttcggccaaagaatagcgaagcagca 2944
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 359 cacaccgctcgaggagctcaaagctcagactaatttcggccaaagaatagcgaagcagca 418
Query: 2945 gtggtggatgaagttacgccctttgttgcgtatcctcgccaaacacgattccacgtacga 3004
|||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||
Sbjct: 419 gtggtggatgaagttacgtcctttgttgcgtatcctcgccaaacacgattccacgtacga 478
Query: 3005 ggaagagggcatgtacatgacagtggaacaaggagaattggatcctgaacatgttatcta 3064
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 479 ggaagagggcatgtacatgacagtggaacaaggagaattggatcctgaacatgttatcta 538
Query: 3065 atctagtcatttgatcatttgaaattatattagacccacatacattggtataaaaatgtt 3124
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 539 atctagtcatttgatcatttgaaattatattagacccacatacattggtataaaaatgtt 598
Query: 3125 gctagatgcaaaaatttgttttagaaatatagtattattatcaatataatcgtgttaaga 3184
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 599 gctagatgcaaaaatttgttttagaaatatagtattattatcaatataatcgtgttaaga 658
Query: 3185 tataattttcacatcatatatttttgaattttatttaaatcagagacttgttacgctttg 3244
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 659 aataattttcacatcatatatttttgaattttatttaaatcagagacttgttacgctttg 718
Query: 3245 atgaaattgtactattgctagagattgatttttttcaaggaatgtgag 3292
|||||||||||||||||||||||||||| |||||||||||||||||||
Sbjct: 719 atgaaattgtactattgctagagattga-ttttttcaaggaatgtgag 765
>BF01012B1H05
Length = 582
Score = 991 bits (500), Expect = 0.0
Identities = 500/500 (100%)
Strand = Plus / Plus
Query: 1470 caggagcgtaagtccggtcagaggcttaatataatcatagtagctgagggggccatcgat 1529
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 83 caggagcgtaagtccggtcagaggcttaatataatcatagtagctgagggggccatcgat 142
Query: 1530 cgcgagggtcaacctatcaccgcggagctagttaagaaggtggttgttgacaaccttcaa 1589
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 143 cgcgagggtcaacctatcaccgcggagctagttaagaaggtggttgttgacaaccttcaa 202
Query: 1590 caagacacgcgcatcactgtccttggacacgtgcaaagaggaggatcaccatcagctttt 1649
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 203 caagacacgcgcatcactgtccttggacacgtgcaaagaggaggatcaccatcagctttt 262
Query: 1650 gatagaattctcggttgtcgcatgggcgctgaggccgtgatggctctaatggaagccacg 1709
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 263 gatagaattctcggttgtcgcatgggcgctgaggccgtgatggctctaatggaagccacg 322
Query: 1710 cccgaaactgaaccgtgtgtggtgaccctggacggaaaccaagctgttcgcctgccgctc 1769
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 323 cccgaaactgaaccgtgtgtggtgaccctggacggaaaccaagctgttcgcctgccgctc 382
Query: 1770 atggattgtgtgcgacgtactaaagccgtggcacaggctatggctgacaaaaactgggat 1829
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 383 atggattgtgtgcgacgtactaaagccgtggcacaggctatggctgacaaaaactgggat 442
Query: 1830 ttagcggtccaactgcgcggacgcagttttgcaaggaatctggaaacatacaaaatgttg 1889
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 443 ttagcggtccaactgcgcggacgcagttttgcaaggaatctggaaacatacaaaatgttg 502
Query: 1890 acccgtctcaaaccgcctaaggaagctttcgacgcctccggcagaccgaccgagggttat 1949
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 503 acccgtctcaaaccgcctaaggaagctttcgacgcctccggcagaccgaccgagggttat 562
Query: 1950 actctggcggtgatgcacgt 1969
||||||||||||||||||||
Sbjct: 563 actctggcggtgatgcacgt 582
Score = 168 bits (85), Expect = 4e-41
Identities = 85/85 (100%)
Strand = Plus / Plus
Query: 1169 gtcttctgaggctgattatgtgtttatacccgaatcaccacctacagtggactggagaga 1228
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1 gtcttctgaggctgattatgtgtttatacccgaatcaccacctacagtggactggagaga 60
Query: 1229 taagctttgttataaattagaacag 1253
|||||||||||||||||||||||||
Sbjct: 61 taagctttgttataaattagaacag 85
Database: est
Posted date: Jul 14, 2011 2:25 PM
Number of letters in database: 8,280,457
Number of sequences in database: 9484
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.37 0.711 1.31
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Sequences: 9484
Number of Hits to DB: 452,767
Number of extensions: 10542
Number of successful extensions: 10542
Number of sequences better than 1.0e-10: 3
Number of HSP's gapped: 10540
Number of HSP's successfully gapped: 5
Length of query: 3565
Length of database: 8,280,457
Length adjustment: 18
Effective length of query: 3547
Effective length of database: 8,109,745
Effective search space: 28765265515
Effective search space used: 28765265515
X1: 11 (21.8 bits)
X2: 15 (29.7 bits)
X3: 50 (99.1 bits)
S1: 12 (24.3 bits)
S2: 35 (69.9 bits)