BLASTN 2.2.24 [Aug-08-2010]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= DPGLEAN04643 (UTR included)
(2752 letters)
Database: est
9484 sequences; 8,280,457 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
BF01051A1E12 868 0.0
BF01017A2E11 543 e-154
>BF01051A1E12
Length = 785
Score = 868 bits (438), Expect = 0.0
Identities = 446/449 (99%)
Strand = Plus / Plus
Query: 1331 ttgtgataaatgtccaagaatatcaaagtctgaagctgcgatggccaaacataaattaag 1390
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 337 ttgtgataaatgtccaagaatatcaaagtctgaagctgcgatggccaaacataaattaag 396
Query: 1391 acacataccaaagtcagagaggaagtttaattgtaattcttgtgataaattctttaattc 1450
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 397 acacataccaaagtcagagaggaagtttaattgtaattcttgtgataaattctttaattc 456
Query: 1451 aaaggaacttttgaaatcccatgcgaaatctcacataccgatagaagaaagaaaaatata 1510
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 457 aaaggaacttttgaaatcccatgcgaaatctcacataccgatagaagaaagaaaaatata 516
Query: 1511 ccgttgtgatatatgtttcttaaagttcacaacccggtcttcgtgtgcgtctcacaagcg 1570
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 517 ccgttgtgatatatgtttcttaaagttcacaacccggtcttcgtgtgcgtctcacaagcg 576
Query: 1571 tatagtccacgacaagatcaagagctacgtgtgtgacctgtgtgggtacgcgtgtggtac 1630
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 577 tatagtccacgacaagatcaagagctacgtgtgtgacctgtgtgggtacgcgtgtggtac 636
Query: 1631 cggcggggaactgagacaacacacggccatacacagcgaggataaacccttcacatgcat 1690
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 637 cggcggggaactgagacaacacacggccatacacagcgaggataaacccttcacatgcat 696
Query: 1691 taagtgttacaagtcgttcaagacgtactctaatctgaagactcacatggacacccacga 1750
|||||||||||||||||||||||||||||| ||||||||||||||||||||||| |||||
Sbjct: 697 taagtgttacaagtcgttcaagacgtactccaatctgaagactcacatggacactcacga 756
Query: 1751 agacacctcgtacgcgtgtcacgtttgta 1779
||||||||||||||||||||||||||||
Sbjct: 757 ngacacctcgtacgcgtgtcacgtttgta 785
>BF01017A2E11
Length = 357
Score = 543 bits (274), Expect = e-154
Identities = 297/304 (97%), Gaps = 3/304 (0%)
Strand = Plus / Plus
Query: 2043 gtgcacatgcacacacacaccggggataagccgctcagctgtaagtggtgcgacgaacgt 2102
|||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||
Sbjct: 31 gtgcacatgcacacacacaccggggacaagccgctcagctgtaagtggtgcgacgaacgt 90
Query: 2103 ttctcatacgcctccacgcttcgctcgcaccgtttaagatgtcacccggacaagatggcg 2162
|||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||
Sbjct: 91 ttctcatacgcctccacgcttcgctcgcaccgcttaagatgtcacccggacaagatggcg 150
Query: 2163 gccaggtatccgccatacc---ttacacaagagggataccttaaatctgatgcagctccc 2219
||||||||||||||||||| ||||||| ||||||||||||||||||||||||||||||
Sbjct: 151 gccaggtatccgccataccaccttacacaggagggataccttaaatctgatgcagctccc 210
Query: 2220 gtcatgaagggcgacttggaggctatacagtagtttaacaaaaatttatttcattatcaa 2279
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 211 gtcatgaagggcgacttggaggctatacagtagtttaacaaaaatttatttcattatcaa 270
Query: 2280 aattgtataagtgatattttattacattatttttctttttaaatcaaatacacattgaaa 2339
|||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||
Sbjct: 271 aattgtataagtgatattttattacattatttttctttttaaatcaaaaacacattgaaa 330
Query: 2340 ctga 2343
||||
Sbjct: 331 ctga 334
Score = 327 bits (165), Expect = 5e-89
Identities = 168/169 (99%)
Strand = Plus / Plus
Query: 1866 aaagccttcaagagacggcagaccttgaaggtgcacatgcacacacacaccggggacaag 1925
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1 aaagccttcaagagacggcagaccttgaaggtgcacatgcacacacacaccggggacaag 60
Query: 1926 ccgctcagctgtaagtggtgcgacgaacgtttctcatacgcctccacgcttcgctcgcac 1985
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 61 ccgctcagctgtaagtggtgcgacgaacgtttctcatacgcctccacgcttcgctcgcac 120
Query: 1986 cgtttaagatgtcacccggacaagatggcggccaggtatccgccatacc 2034
|| ||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 121 cgcttaagatgtcacccggacaagatggcggccaggtatccgccatacc 169
Database: est
Posted date: Jul 14, 2011 2:25 PM
Number of letters in database: 8,280,457
Number of sequences in database: 9484
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.37 0.711 1.31
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Sequences: 9484
Number of Hits to DB: 386,627
Number of extensions: 8683
Number of successful extensions: 8683
Number of sequences better than 1.0e-10: 3
Number of HSP's gapped: 8682
Number of HSP's successfully gapped: 4
Length of query: 2752
Length of database: 8,280,457
Length adjustment: 17
Effective length of query: 2735
Effective length of database: 8,119,229
Effective search space: 22206091315
Effective search space used: 22206091315
X1: 11 (21.8 bits)
X2: 15 (29.7 bits)
X3: 50 (99.1 bits)
S1: 12 (24.3 bits)
S2: 34 (67.9 bits)