BLASTN 2.2.24 [Aug-08-2010]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= DPGLEAN04669 (UTR included)
(6813 letters)
Database: est
9484 sequences; 8,280,457 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
BF01009A2G03 1600 0.0
BF01018B1E06 1148 0.0
>BF01009A2G03
Length = 871
Score = 1600 bits (807), Expect = 0.0
Identities = 825/831 (99%)
Strand = Plus / Plus
Query: 3842 cctgaaaaacgctttaacctccacgagcgatatattctcacccgacacgtcctatggttc 3901
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1 cctgaaaaacgctttaacctccacgagcgatatattctcacccgacacgtcctatggttc 60
Query: 3902 agaaaacgttgctacgccgagtgtagaaaaaagtatactagaagtgaatgacgccatgaa 3961
||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 61 agaaaacgtcgctacgccgagtgtagaaaaaagtatactagaagtgaatgacgccatgaa 120
Query: 3962 agacaaagaccaggacagtagaagcgagaacgagctgtttcatttcgagtcggataaaga 4021
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 121 agacaaagaccaggacagtagaagcgagaacgagctgtttcatttcgagtcggataaaga 180
Query: 4022 cagaaatcctagtatcagtagtagaagcaagtccccgaccggatccatggattcaaacac 4081
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 181 cagaaatcctagtatcagtagtagaagcaagtccccgaccggatccatggattcaaacac 240
Query: 4082 tgtcgtcaaagacacaaacgcgtcacagacgccgtcaccctccgcagatattacatcacc 4141
||||||||| ||||||||||||||||||||||||||||| ||||||||||||||||||||
Sbjct: 241 tgtcgtcaaggacacaaacgcgtcacagacgccgtcaccttccgcagatattacatcacc 300
Query: 4142 tggtaattctagattcttcacaaacattaagtcaccgaattccaaagatacgattataat 4201
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 301 tggtaattctagattcttcacaaacattaagtcaccgaattccaaagatacgattataat 360
Query: 4202 aacaaaagacgacagccagaatgtattaaataaaaaattgccaacgtcccccaccataga 4261
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 361 aacaaaagacgacagccagaatgtattaaataaaaaattgccaacgtcccccaccataga 420
Query: 4262 cataccgagacccatgttcacgagctacttgcatttcgctgacgatgtgtcacgatcaga 4321
|||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 421 cataccgagaccgatgttcacgagctacttgcatttcgctgacgatgtgtcacgatcaga 480
Query: 4322 aggagatgaaaatatgactgagtataacgttcgtcaaatcaagagtctggaactgactcg 4381
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 481 aggagatgaaaatatgactgagtataacgttcgtcaaatcaagagtctggaactgactcg 540
Query: 4382 caataatgtagggaagaattacagtgcgtttgacattagcgaggaagataatgatttcgg 4441
|||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||
Sbjct: 541 caataatgtagggaagaattacagtgcgtttgacattagcgaagaagataatgatttcgg 600
Query: 4442 caaagatagagataataaaatttccgatatgagttcggagagtctcatctggctggcgca 4501
|||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||
Sbjct: 601 caaagatagagataataaaatttccgatatgagttcggagagcctcatctggctggcgca 660
Query: 4502 tcgactgggcccggttcttacatgtagatacataacaaggaacttgctcaaaatgctcac 4561
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 661 tcgactgggcccggttcttacatgtagatacataacaaggaacttgctcaaaatgctcac 720
Query: 4562 cttgtgttacatcggcaaagagaacctggcgtcatgggacagcgatgacaaagacgaatt 4621
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 721 cttgtgttacatcggcaaagagaacctggcgtcatgggacagcgatgacaaagacgaatt 780
Query: 4622 cgacaaaatgtccattgtcaatagcaaagtggtcggtgacaaaaatgctat 4672
|||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 781 cgacaaaatgtccattgtcaatagcaaagtggtcggtgacaaaaatgctat 831
>BF01018B1E06
Length = 593
Score = 1148 bits (579), Expect = 0.0
Identities = 589/593 (99%)
Strand = Plus / Plus
Query: 1658 tcagttggatatgacatacgatgtgactggctgcgatggacagattccacaccatgttac 1717
||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||
Sbjct: 1 tcagttggatatgacatacgatgtgactggctgcgatgggcagattccacaccatgttac 60
Query: 1718 tgatgcactctccgatatcacctgttacgtttacttagctcggaggactccaaaagacat 1777
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 61 ggatgcactctccgatatcacctgttacgtttacttagctcggaggactccaaaagacat 120
Query: 1778 actgtgtaagtacgtccgcaacaagtgggtcccagctgagtatccagcttctatacagag 1837
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 121 actgtgtaagtacgtccgcaacaagtgggtcccagctgagtatccagcttctatacagag 180
Query: 1838 gatgcaggagtggacaccagatgaatgcatacccgagttctacacagaccctacagtctt 1897
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 181 gatgcaggagtggacaccagatgaatgcatacccgagttctacacagaccctacagtctt 240
Query: 1898 taagagtatacatgaagatctgccggatctaagtataccgtcgtgggctacctgtgtgga 1957
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 241 taagagtatacatgaagatctgccggatctaagtataccgtcgtgggctacctgtgtgga 300
Query: 1958 agatttcataacgaagcacagagaggcgttggagagtgcgcatgtatcagacaaccttca 2017
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 301 agatttcataacgaagcacagagaggcgttggagagtgcgcatgtatcagacaaccttca 360
Query: 2018 tcactggatcgatattacctttggttacaaattatccggttcatcggcagtgaaggctaa 2077
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 361 tcactggatcgatattacctttggttacaaattatccggttcatcggcagtgaaggctaa 420
Query: 2078 gaacgtgtgcctctcgcttgtggacggtcactgccgcactcggcgcggcggcaccgtgca 2137
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 421 gaacgtgtgcctctcgcttgtggacggtcactgccgcactcggcgcggcggcaccgtgca 480
Query: 2138 gctgctgtgcgctccccaccctccccgccgcccgcgcgccccccctccactgccgctcag 2197
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 481 gctgctgtgcgctccccaccctccccgccgcccgcgcgccccccctccactgccgctcag 540
Query: 2198 gatgaggtggaccacaccaagggacccacgaaaatccgtccatgatagttcag 2250
||||||||||||||||||||||||||||||| ||||||||||||||||||||
Sbjct: 541 gatgaggtggaccacaccaagggacccacgannatccgtccatgatagttcag 593
Database: est
Posted date: Jul 14, 2011 2:25 PM
Number of letters in database: 8,280,457
Number of sequences in database: 9484
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.37 0.711 1.31
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Sequences: 9484
Number of Hits to DB: 106,639
Number of extensions: 12432
Number of successful extensions: 12432
Number of sequences better than 1.0e-10: 2
Number of HSP's gapped: 12432
Number of HSP's successfully gapped: 2
Length of query: 6813
Length of database: 8,280,457
Length adjustment: 18
Effective length of query: 6795
Effective length of database: 8,109,745
Effective search space: 55105717275
Effective search space used: 55105717275
X1: 11 (21.8 bits)
X2: 15 (29.7 bits)
X3: 50 (99.1 bits)
S1: 12 (24.3 bits)
S2: 35 (69.9 bits)