BLASTN 2.2.24 [Aug-08-2010]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= DPGLEAN04671 (UTR included)
         (1675 letters)

Database: est 
           9484 sequences; 8,280,457 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

BF01029A1A09                                                          165   3e-40
BF01055B2F03                                                          117   6e-26

>BF01029A1A09
          Length = 732

 Score =   bits (83), Expect = 3e-40
 Identities = 107/114 (93%), Gaps = 2/114 (1%)
 Strand = Plus / Plus

                                                                        
Query: 1169 catgtagtcttaggtataggttataagttttaatatgtaattctt--attataatataca 1226
            |||||||||||||||||||||||||||||||||||||||||| ||  |||||||||||||
Sbjct: 1    catgtagtcttaggtataggttataagttttaatatgtaatttttttattataatataca 60

                                                                  
Query: 1227 tatgagtaagtttcgtagttttcctcgaacctccggttgccaccatatataatt 1280
            ||| |||| |||||||||||||||| |||||||||||||||||| |||||||||
Sbjct: 61   tataagtatgtttcgtagttttcctggaacctccggttgccaccttatataatt 114


>BF01055B2F03
          Length = 776

 Score =   bits (59), Expect = 6e-26
 Identities = 101/115 (87%)
 Strand = Plus / Minus

                                                                        
Query: 1064 tgacgccgctgactccgcggaacgaacacccagccgtgtgaaccagaagattcctgatac 1123
            ||||||||||||||||||||||| ||||||  |||| ||||||||| ||| |||||| ||
Sbjct: 675  tgacgccgctgactccgcggaaccaacaccgcgccgcgtgaaccaggagactcctgacac 616

                                                                   
Query: 1124 cacacaagctatggaatggcattgctatcctaacatcggggcagtcatgtagtct 1178
            |||||| ||||||||||||||| ||||| || || |||||||| ||| |||||||
Sbjct: 615  cacacacgctatggaatggcatggctatgcttacgtcggggcaatcaagtagtct 561


  Database: est
    Posted date:  Jul 14, 2011  2:25 PM
  Number of letters in database: 8,280,457
  Number of sequences in database:  9484
  
Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.37    0.711     1.31 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Sequences: 9484
Number of Hits to DB: 223,816
Number of extensions: 4988
Number of successful extensions: 4988
Number of sequences better than 1.0e-10: 2
Number of HSP's gapped: 4987
Number of HSP's successfully gapped: 2
Length of query: 1675
Length of database: 8,280,457
Length adjustment: 17
Effective length of query: 1658
Effective length of database: 8,119,229
Effective search space: 13461681682
Effective search space used: 13461681682
X1: 11 (21.8 bits)
X2: 15 (29.7 bits)
X3: 50 (99.1 bits)
S1: 12 (24.3 bits)
S2: 34 (67.9 bits)