BLASTN 2.2.24 [Aug-08-2010]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= DPGLEAN04678 (UTR included)
(3172 letters)
Database: est
9484 sequences; 8,280,457 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
BF14_729_C3 1953 0.0
BF01052B2H06 1552 0.0
BF01049A2D11 202 2e-51
BF14_729_C1 194 6e-49
>BF14_729_C3
Length = 2041
Score = 1953 bits (985), Expect = 0.0
Identities = 1023/1037 (98%)
Strand = Plus / Plus
Query: 496 tattcatggaggacttcgaggtgcgagccctttgctctcctcctataagacctttaattt 555
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 511 tattcatggaggacttcgaggtgcgagccctttgctctcctcctataagacctttaattt 570
Query: 556 ataaacggtatgtagatgacaccttcacaatattaaataaaaataaaacatctgcttttc 615
|||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||
Sbjct: 571 ttaaacggtatgtagatgacacctttacaatattaaataaaaataaaacatctgcttttc 630
Query: 616 tgaaccatctcaattctatcaatagtaagattcagtgtactatagaattggaggcaaata 675
|||||||||||||||||||||||| ||||||||||| |||||||||||||||||||||||
Sbjct: 631 tgaaccatctcaattctatcaataataagattcagtttactatagaattggaggcaaata 690
Query: 676 attctttagctttccttgatatacttgttgttaggaatcctgacaatactttgggacata 735
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 691 attctttagctttccttgatatacttgttgttaggaatcctgacaatactttgggacata 750
Query: 736 ctgtttataggaaacccacacatacggacaggtacctcaatggttactcacaccaccacc 795
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 751 ctgtttataggaaacccacacatacggacaggtacctcaatggttactcacaccaccacc 810
Query: 796 ctatccagttagctaccgttggcaaatctttgttacagagagcccaacatctttgtgatg 855
||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||
Sbjct: 811 ctatccagttagctaccgttggcaaatctttgttacagagagcccaacacctttgtgatg 870
Query: 856 ctgaccacctagaggccgagctgcagcatgtaaaacatgctctcactatcaacaacctgc 915
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 871 ctgaccacctagaggccgagctgcagcatgtaaaacatgctctcactatcaacaacctgc 930
Query: 916 ccgtgcctcgccagcatcgcaagaagcacctgaagccacccacagttgaacgacaacctg 975
||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||
Sbjct: 931 ccgtgcctcgccagcatcgcaagaaccacctgaagccacccacagttgaacgacaacctg 990
Query: 976 cgatactaccatatgtgaagggagttactgacagaataggcaacatcttgaagaaggttt 1035
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 991 cgatactaccatatgtgaagggagttactgacagaataggcaacatcttgaagaaggttt 1050
Query: 1036 ccattaaaactatttacaaaccacataagaaagtgagccaattcttgagaccaatcaaga 1095
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
Sbjct: 1051 ccattaaaactatttacaaaccacataagaaagtgagccaattcttgagaccaatcaaaa 1110
Query: 1096 gtaacattcctttacaacaagcgggtgtatacaaactcgactgtgactgtgtcttgtcat 1155
||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||
Sbjct: 1111 gtaacattcctttacaacaagcgggtgtatacaaactcgactgtgactgtggcttgtcat 1170
Query: 1156 acattggacagacgaagaggagcatcggtacaagggttaaggaacacatctcagatatca 1215
|||||||||||||||||||||||||||||||||| |||||||||||||||||||| ||||
Sbjct: 1171 acattggacagacgaagaggagcatcggtacaagagttaaggaacacatctcagacatca 1230
Query: 1216 aaaacaggcgcgcgtcgaagtcagcagtgtgtgaacacacaatggacaaaccaggccact 1275
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1231 aaaacaggcgcgcgtcgaagtcagcagtgtgtgaacacacaatggacaaaccaggccact 1290
Query: 1276 acattcgttttgataaacctcaaatcctcgctcgggaagacaagtatataccgagattaa 1335
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1291 acattcgttttgataaacctcaaatcctcgctcgggaagacaagtatataccgagattaa 1350
Query: 1336 ttcgcgaggctattgaaattaaaaaacatcccaatttcaatagagaagatggctggaatc 1395
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1351 ttcgcgaggctattgaaattaaaaaacatcccaatttcaatagagaagatggctggaatc 1410
Query: 1396 tatcaaacacctgggaccccgttcttaaaaatataaaatcccatgtccgaaaccacaccg 1455
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1411 tatcaaacacctgggaccccgttcttaaaaatataaaatcccatgtccgaaaccacaccg 1470
Query: 1456 caggacctcaagacaccgtgagcgcattctgccggcatccagagcggtacgccagaaaat 1515
|||||||||||||||||||||||||||||||||||||||||||||||||||||| ||
Sbjct: 1471 caggacctcaagacaccgtgagcgcattctgccggcatccagagcggtacgccannnnat 1530
Query: 1516 taagaaatcgatggcgg 1532
|||||||||||||||||
Sbjct: 1531 taagaaatcgatggcgg 1547
Score = 87.7 bits (44), Expect = 1e-16
Identities = 50/52 (96%)
Strand = Plus / Minus
Query: 537 cctataagacctttaatttataaacggtatgtagatgacaccttcacaatat 588
||||||||||||||||| |||||||||||||||| |||||||||||||||||
Sbjct: 489 cctataagacctttaatatataaacggtatgtagttgacaccttcacaatat 438
>BF01052B2H06
Length = 806
Score = 1552 bits (783), Expect = 0.0
Identities = 792/795 (99%)
Strand = Plus / Plus
Query: 1716 atctgggaacgtttacgtgaagttggagtccccgacaaaataatcaacctgataaaagcc 1775
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 12 atctgggaacgtttacgtgaagttggagtccccgacaaaataatcaacctgataaaagcc 71
Query: 1776 ctctacaggaaatattcctgtaaagtaattcacaacggtcttttgtcggaggacatacca 1835
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 72 ctctacaggaaatattcctgtaaagtaattcacaacggtcttttgtcggaggacatacca 131
Query: 1836 gtcaatgcaggtgttcgccaggggtgtctcctttctcctattctcttccttgtcgttctg 1895
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 132 gtcaatgcaggtgttcgccaggggtgtctcctttctcctattctcttccttgtcgttctg 191
Query: 1896 gatggtatcatgcagaaagtgacgaaaagcaagcgccgcggcatagaatggggactgtcc 1955
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 192 gatggtatcatgcagaaagtgacgaaaagcaagcgccgcggcatagaatggggactgtcc 251
Query: 1956 agcactttggaagatttggactatgccgatgacctatgcctgctgagccatacacacgcc 2015
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 252 agcactttggaagatttggactatgccgatgacctatgcctgctgagccatacacacgcc 311
Query: 2016 aacatgcaaaccaaactggacgacctacgacgagaagcattagagatggggctaaaaata 2075
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 312 aacatgcaaaccaaactggacgacctacgacgagaagcattagagatggggctaaaaata 371
Query: 2076 aacacgcgaaagacccaggagatgaggtgcggagcaacaacctctctgccgttgctcatt 2135
|||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 372 aacacgcgtaagacccaggagatgaggtgcggagcaacaacctctctgccgttgctcatt 431
Query: 2136 ggcacagaggctatagaaaaaatccacaaatacacctacctaggaagcatagtatcggag 2195
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 432 ggcacagaggctatagaaaaaatccacaaatacacctacctaggaagcatagtatcggag 491
Query: 2196 agtggaggtgccgaagaggacatcgcttcgagaatcgccaaatcaagagcagccttcgcg 2255
|||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||
Sbjct: 492 agtggaggtgccgaagaggacatcgcttcgagaatcgccaaatcaaaagcagccttcgcg 551
Query: 2256 caactccgtcctgtatggcagtcgcggaaactaaccaggagagttaaactcaaaatattc 2315
||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||
Sbjct: 552 caactccgtcctgtatggcagtcgcggaaactaaccaggagggttaaactcaaaatattc 611
Query: 2316 cggtccaacgtcaaatccgtgctgttatacggatgtgagacgtggaaggttactaaggac 2375
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 612 cggtccaacgtcaaatccgtgctgttatacggatgtgagacgtggaaggttactaaggac 671
Query: 2376 atctcgcatcggcttcaggtcttcgtcaattggtgtcttcgccgtattctcggtatttac 2435
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 672 atctcgcatcggcttcaggtcttcgtcaattggtgtcttcgccgtattctcggtatttac 731
Query: 2436 tggcccgagaaaatttccaacgttaatctctgggaacgctgcggtgagacaccgattgac 2495
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 732 tggcccgagaaaatttccaacgttaatctctgggaacgctgcggtgagacaccgattgac 791
Query: 2496 ctgcaaatcaaacgt 2510
|||||||||||||||
Sbjct: 792 ctgcaaatcaaacgt 806
>BF01049A2D11
Length = 776
Score = 202 bits (102), Expect = 2e-51
Identities = 148/162 (91%), Gaps = 1/162 (0%)
Strand = Plus / Plus
Query: 1149 ttgtcatacattggacagacgaagaggagcatcggtacaagggttaaggaacacatctca 1208
|||||||||||||||||||| ||||||||||||| |||||||||||| ||||||||||||
Sbjct: 614 ttgtcatacattggacagacaaagaggagcatcgatacaagggttaaagaacacatctca 673
Query: 1209 gatatcaa-aaacaggcgcgcgtcgaagtcagcagtgtgtgaacacacaatggacaaacc 1267
|| |||| ||| ||| | | |||||||||||||| |||||||||||||||||||||||
Sbjct: 674 gaaatcatgaaataggtgtacatcgaagtcagcagtatgtgaacacacaatggacaaacc 733
Query: 1268 aggccactacattcgttttgataaacctcaaatcctcgctcg 1309
||||||||||||||| ||||||||||| ||||||||||||||
Sbjct: 734 aggccactacattcggtttgataaaccacaaatcctcgctcg 775
>BF14_729_C1
Length = 981
Score = 194 bits (98), Expect = 6e-49
Identities = 132/142 (92%), Gaps = 1/142 (0%)
Strand = Plus / Minus
Query: 994 agggagttactgacagaataggcaacatcttgaagaaggtttccattaaaactatttaca 1053
|||||||||||||||||||||||||||| ||||||||| ||||||| || |||||| |||
Sbjct: 142 agggagttactgacagaataggcaacattttgaagaagctttccatcaagactattcaca 83
Query: 1054 aaccacataagaaagtgagccaattcttgagaccaatcaagagtaacattcctttacaac 1113
|||||||||||||||||||||||||||||||||| ||||||||||||||| | || |||
Sbjct: 82 aaccacataagaaagtgagccaattcttgagacctatcaagagtaacatt-cattggaac 24
Query: 1114 aagcgggtgtatacaaactcga 1135
||||||||||||||||||||||
Sbjct: 23 aagcgggtgtatacaaactcga 2
Database: est
Posted date: Jul 14, 2011 2:25 PM
Number of letters in database: 8,280,457
Number of sequences in database: 9484
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.37 0.711 1.31
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Sequences: 9484
Number of Hits to DB: 387,220
Number of extensions: 8578
Number of successful extensions: 8578
Number of sequences better than 1.0e-10: 4
Number of HSP's gapped: 8577
Number of HSP's successfully gapped: 6
Length of query: 3172
Length of database: 8,280,457
Length adjustment: 18
Effective length of query: 3154
Effective length of database: 8,109,745
Effective search space: 25578135730
Effective search space used: 25578135730
X1: 11 (21.8 bits)
X2: 15 (29.7 bits)
X3: 50 (99.1 bits)
S1: 12 (24.3 bits)
S2: 34 (67.9 bits)