BLASTN 2.2.24 [Aug-08-2010]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= DPGLEAN04685 (UTR included)
(862 letters)
Database: est
9484 sequences; 8,280,457 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
BF14_3305_C1 438 e-123
>BF14_3305_C1
Length = 1113
Score = 438 bits (221), Expect = e-123
Identities = 252/261 (96%), Gaps = 1/261 (0%)
Strand = Plus / Plus
Query: 28 agggttggaatcaagttgatatggatgtccgaggacaggttcaagaaagattccagtgct 87
|||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||
Sbjct: 589 agggttggaatcaagttgatatggatgtccgaggacaggttcaaaaaagattccagtgct 648
Query: 88 gtggcttccaaagccgagatttcaaaccaaacactactagcgaccatccatcctgtgttc 147
| |||||||| |||||||| || |||||||||||||||||||||||||||||||||||||
Sbjct: 649 gcggcttccagagccgagactttaaaccaaacactactagcgaccatccatcctgtgttc 708
Query: 148 tcgctgatcaattgtgttgtaacagtc-tgacaataagagatgactgccaatgtcagcct 206
||||||||||| ||||||||||||| | ||||||||||||||||||||||||||||||||
Sbjct: 709 tcgctgatcaagtgtgttgtaacagacntgacaataagagatgactgccaatgtcagcct 768
Query: 207 tgtatggagaaattaaaagaaactattgattatgcgttcaagctgtgcggtggtatcgga 266
|||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||
Sbjct: 769 tgtatggagaaattaaaagaaactattgattatgcgttcaagctgtgcggcggtatcgga 828
Query: 267 ctgttctttagcttcaccgag 287
|||||||||||||||||||||
Sbjct: 829 ctgttctttagcttcaccgag 849
Database: est
Posted date: Jul 14, 2011 2:25 PM
Number of letters in database: 8,280,457
Number of sequences in database: 9484
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.37 0.711 1.31
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Sequences: 9484
Number of Hits to DB: 132,664
Number of extensions: 3069
Number of successful extensions: 3069
Number of sequences better than 1.0e-10: 1
Number of HSP's gapped: 3068
Number of HSP's successfully gapped: 1
Length of query: 862
Length of database: 8,280,457
Length adjustment: 17
Effective length of query: 845
Effective length of database: 8,119,229
Effective search space: 6860748505
Effective search space used: 6860748505
X1: 11 (21.8 bits)
X2: 15 (29.7 bits)
X3: 50 (99.1 bits)
S1: 12 (24.3 bits)
S2: 33 (65.9 bits)