BLASTN 2.2.24 [Aug-08-2010]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= DPGLEAN04719 (UTR included)
(2572 letters)
Database: est
9484 sequences; 8,280,457 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
BF01053A2B08 1398 0.0
>BF01053A2B08
Length = 753
Score = 1398 bits (705), Expect = 0.0
Identities = 732/741 (98%)
Strand = Plus / Plus
Query: 1050 ggtaacgagactggccgaatagaattcaaccccatgagagtgagaactcactttataaat 1109
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 13 ggtaacgagactggccgaatagaattcaaccccatgagagtgagaactcactttataaat 72
Query: 1110 accttaatgagattaggcctagaaaagaaaaatgaagaggctcaggaggctgtaaaacgt 1169
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 73 accttaatgagattaggcctagaaaagaaaaatgaagaggctcaggaggctgtaaaacgt 132
Query: 1170 aaatgggcggaagcgcatatttcgtcgacatgtgttacagattcatcttacgaaaaagaa 1229
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 133 aaatgggcggaagcgcatatttcgtcgacatgtgttacagattcatcttacgaaaaagaa 192
Query: 1230 aactgtcatatccaagataataatttggcttccaatactaattcaacccccaggataggt 1289
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 193 aactgtcatatccaagataataatttggcttccaatactaattcaacccccaggataggt 252
Query: 1290 atagaatcctgcatcagcccaggtttcactggtattcatcataacattaacagtatacct 1349
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 253 atagaatcctgcatcagcccaggtttcactggtattcatcataacattaacagtatacct 312
Query: 1350 tgcaataatcaaaatgatgcatcatataattttagaaatgaccaaacagatcatagaaat 1409
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 313 tgcaataatcaaaatgatgcatcatataattttagaaatgaccaaacagatcatagaaat 372
Query: 1410 attaagtccaacaacatgatgaactttcatgatgagtccaatcatggaaatcatgattat 1469
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 373 attaagtccaacaacatgatgaactttcatgatgagtccaatcatggaaatcatgattat 432
Query: 1470 acctcaaacatacttcaaggaaaaggtccaccctactcatcaccggcgatgaacttcaat 1529
||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 433 acctcgaacatacttcaaggaaaaggtccaccctactcatcaccggcgatgaacttcaat 492
Query: 1530 atgtcaaataacatgcaaagatatcccgatctcaactatacttacgatcaacaacattca 1589
|||||||||||||||||||||||||| |||||||||||| |||| |||||||||||||||
Sbjct: 493 atgtcaaataacatgcaaagatatcctgatctcaactatccttatgatcaacaacattca 552
Query: 1590 gacggacatctctttaaggggattcatagttatccagcatctgcttttgaagagtttgct 1649
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 553 gacggacatctctttaaggggattcatagttatccagcatctgcttttgaagagtttgct 612
Query: 1650 cataactctcagatgacaatgctgaatcattatggccatatgtatgtccctgaatactta 1709
|| ||||||||||||||||||||||||||||||||||||||||| |||||||||||||||
Sbjct: 613 cacaactctcagatgacaatgctgaatcattatggccatatgtacgtccctgaatactta 672
Query: 1710 cacaaaccaagtacaagtatgccggaacacagcatgcagtatcacatgatgcaacaaaac 1769
|||||||| ||||| ||||||||||||||||| |||||||||||||||||||||||||||
Sbjct: 673 cacaaacctagtacgagtatgccggaacacagtatgcagtatcacatgatgcaacaaaac 732
Query: 1770 cactatgatatgtataaaaac 1790
|||||||||||||||||||||
Sbjct: 733 cactatgatatgtataaaaac 753
Database: est
Posted date: Jul 14, 2011 2:25 PM
Number of letters in database: 8,280,457
Number of sequences in database: 9484
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.37 0.711 1.31
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Sequences: 9484
Number of Hits to DB: 308,179
Number of extensions: 6236
Number of successful extensions: 6236
Number of sequences better than 1.0e-10: 1
Number of HSP's gapped: 6236
Number of HSP's successfully gapped: 1
Length of query: 2572
Length of database: 8,280,457
Length adjustment: 17
Effective length of query: 2555
Effective length of database: 8,119,229
Effective search space: 20744630095
Effective search space used: 20744630095
X1: 11 (21.8 bits)
X2: 15 (29.7 bits)
X3: 50 (99.1 bits)
S1: 12 (24.3 bits)
S2: 34 (67.9 bits)