BLASTN 2.2.24 [Aug-08-2010]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= DPGLEAN04722 (UTR included)
(2122 letters)
Database: est
9484 sequences; 8,280,457 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
BF01053B1F09 1437 0.0
BF01060A1E12 640 0.0
>BF01053B1F09
Length = 745
Score = 1437 bits (725), Expect = 0.0
Identities = 741/745 (99%), Gaps = 1/745 (0%)
Strand = Plus / Plus
Query: 352 ataataacttatgttttatttgatttacaaaatagtcaatatgcgtaactttttcgtggg 411
|||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||
Sbjct: 1 ataataacttatgttttatttgatttacaaaatactcaatatgcgtaactttttcgtggg 60
Query: 412 agagtagccagtagcgcctgctagtacttcaaatcacaaatagtagtttaattcaa-ctt 470
|||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||
Sbjct: 61 agagtagccagtagcgcctgctagtacttcaaatcacaaatagtagtttaattcaatctt 120
Query: 471 ccacattcttgacattattatgttgctgaaatgtggtcatggggcgccaattcacatgga 530
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 121 ccacattcttgacattattatgttgctgaaatgtggtcatggggcgccaattcacatgga 180
Query: 531 cagctaggcttagattcaacaagtgaacaaatagacaaacccactgaagtatcaacagaa 590
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 181 cagctaggcttagattcaacaagtgaacaaatagacaaacccactgaagtatcaacagaa 240
Query: 591 catttaagtgatattcaacagattgcctgtggtggtggacacacgttattactagctgaa 650
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 241 catttaagtgatattcaacagattgcctgtggtggtggacacacgttattactagctgaa 300
Query: 651 aatgggaaacttttttcatgcggctggaattcaaggagacaattaggttatgaacaggaa 710
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 301 aatgggaaacttttttcatgcggctggaattcaaggagacaattaggttatgaacaggaa 360
Query: 711 gtttatacattcaagcgagtttggggtttaagcggtatacattttttgaacatagcctgc 770
||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||
Sbjct: 361 gtttatacattcaagcgagtttggggtttaagcggtatacattttatgaacatagcctgc 420
Query: 771 ggctgggatttcagctgtggtgtcactgatgataaattcttatttgtttggggatctaat 830
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 421 ggctgggatttcagctgtggtgtcactgatgataaattcttatttgtttggggatctaat 480
Query: 831 agttatggccagttaggtctacctaaaaatgaatttccagatgaagtgaagccagtcagg 890
||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 481 agttacggccagttaggtctacctaaaaatgaatttccagatgaagtgaagccagtcagg 540
Query: 891 ttacaagtcaatgcatgttcagtgtctatgggattgagacatacagccataataaattcg 950
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 541 ttacaagtcaatgcatgttcagtgtctatgggattgagacatacagccataataaattcg 600
Query: 951 aaaggtgaggtatggacaacaggatgtggaaggcatggccagctaggattaggtcatgat 1010
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 601 aaaggtgaggtatggacaacaggatgtggaaggcatggccagctaggattaggtcatgat 660
Query: 1011 gtgttaaaggcagacagatttcaaagagttcctaaattaagtgttatttctcacatagca 1070
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 661 gtgttaaaggcagacagatttcaaagagttcctaaattaagtgttatttctcacatagca 720
Query: 1071 tgcggacagaaccatactgtaggct 1095
|||||||||||||||||||||||||
Sbjct: 721 tgcggacagaaccatactgtaggct 745
>BF01060A1E12
Length = 882
Score = 640 bits (323), Expect = 0.0
Identities = 353/361 (97%), Gaps = 2/361 (0%)
Strand = Plus / Minus
Query: 1764 agcataaatactagtatgagttaccaattgtagtattaaataaaacaaaaccagatagaa 1823
|||||||||| ||||||||| || |||||| ||||||||||||||||||||||||||||
Sbjct: 882 agcataaataatagtatgagnnactaattgtcgtattaaataaaacaaaaccagatagaa 823
Query: 1824 ttagcatataccttattaatcattattccaacaaacaaaaagcgcttatcactaaaatgt 1883
||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||
Sbjct: 822 ttagcatataccttattaatcattattccaacaaacaaaaagcgcttatcattaaaatgt 763
Query: 1884 atttagtaatcaaaataaattgataaatataaagggaacaaaaatactattaccatgaca 1943
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 762 atttagtaatcaaaataaattgataaatataaagggaacaaaaatactattaccatgaca 703
Query: 1944 tttaaaactgataatttatgactatataatacatagcttaaaaataatatcaaaaaattc 2003
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 702 tttaaaactgataatttatgactatataatacatagcttaaaaataatatcaaaaaattc 643
Query: 2004 agccactatgtcacaaatacgctccttttaaaattgtatatcatccatgaatttatgtta 2063
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 642 agccactatgtcacaaatacgctccttttaaaattgtatatcatccatgaatttatgtta 583
Query: 2064 ttcag-ctaaat-gttttttttttttaatcttgaagttgctacctctttctttcaccttt 2121
||||| |||||| |||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 582 ttcagcctaaatggttttttttttttaatcttgaagttgctacctctttctttcaccttt 523
Query: 2122 t 2122
|
Sbjct: 522 t 522
Database: est
Posted date: Jul 14, 2011 2:25 PM
Number of letters in database: 8,280,457
Number of sequences in database: 9484
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.37 0.711 1.31
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Sequences: 9484
Number of Hits to DB: 318,027
Number of extensions: 19251
Number of successful extensions: 19251
Number of sequences better than 1.0e-10: 2
Number of HSP's gapped: 19248
Number of HSP's successfully gapped: 2
Length of query: 2122
Length of database: 8,280,457
Length adjustment: 17
Effective length of query: 2105
Effective length of database: 8,119,229
Effective search space: 17090977045
Effective search space used: 17090977045
X1: 11 (21.8 bits)
X2: 15 (29.7 bits)
X3: 50 (99.1 bits)
S1: 12 (24.3 bits)
S2: 34 (67.9 bits)