BLASTN 2.2.24 [Aug-08-2010]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= DPGLEAN04726 (UTR included)
(2965 letters)
Database: est
9484 sequences; 8,280,457 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
BF14_1091_C1 1596 0.0
>BF14_1091_C1
Length = 1114
Score = 1596 bits (805), Expect = 0.0
Identities = 838/849 (98%)
Strand = Plus / Plus
Query: 2117 atatctccggaagagaagatctaggagacgtaacactgaagaagagaataatgatcccat 2176
|||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||
Sbjct: 1 atatctccggaagagaagatctagtagacgtaacactgaagaagagaataatgatcccat 60
Query: 2177 accggaagtagtggttcgacagcctacaccgcctctacaggagacagtgccaccttactc 2236
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 61 accggaagtagtggttcgacagcctacaccgcctctacaggagacagtgccaccttactc 120
Query: 2237 accgaggcagttccctctcaaagacgatctctaccaggatatgttatccaaaatgccaga 2296
||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||
Sbjct: 121 accgaggcagttccctctcaaagacgatctctaccaggacatgttatccaaaatgccaga 180
Query: 2297 aggttatcgacccatcagccccgatttagatccggatataaccatggaagaagacacgag 2356
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 181 aggttatcgacccatcagccccgatttagatccggatataaccatggaagaagacacgag 240
Query: 2357 ttccctatcaccgttgtcacctttgaactttgatggtgatgatcccgatgatgccgaatg 2416
|||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||
Sbjct: 241 ttccctatcaccgttgtcacctttgaactttgatggtgatgatcccgatgatgcagaatg 300
Query: 2417 gaatcccagcaatgagaagtcagataaaagaagaagtacgctaagataaatcaccattca 2476
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 301 gaatcccagcaatgagaagtcagataaaagaagaagtacgctaagataaatcaccattca 360
Query: 2477 cacaaacaacggtattgatgttaaataatttattttataataacaatatgacttcataac 2536
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 361 cacaaacaacggtattgatgttaaataatttattttataataacaatatgacttcataac 420
Query: 2537 tggccgtctgaatttttaaacagcatgtcatttattgaggattaaattaacttaatcatc 2596
||||||||||||||| |||||||||||||||||||||||||| |||||||||||||||||
Sbjct: 421 tggccgtctgaatttgtaaacagcatgtcatttattgaggatgaaattaacttaatcatc 480
Query: 2597 aggttcttgcgaggaattactgagatataaactgactatctctgtatgtgatgggactta 2656
|||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||
Sbjct: 481 aggttcttgcgaggaattactgagatgtaaactgactatctctgtatgtgatgggactta 540
Query: 2657 acaacaatatgatgctgaatgtatgggaagggtattagaatagctttctttgagactatt 2716
|||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||
Sbjct: 541 acaacaatatgatgctgaatgtatgggaagggtattagaatagctttcttggagactatt 600
Query: 2717 gttcatgttataatttctggcaaatttataagaaatagcgtctttaatataaaagtattg 2776
||| ||||||||||||||||||||||||||||||| ||||||||||||||||||||||||
Sbjct: 601 gttgatgttataatttctggcaaatttataagaaacagcgtctttaatataaaagtattg 660
Query: 2777 tttgaagaaacctatagcataagaacagtgaatattgagagggattgttctcattagcca 2836
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 661 tttgaagaaacctatagcataagaacagtgaatattgagagggattgttctcattagcca 720
Query: 2837 atgtatgtacaaagtttaactaaattgatgttaaattgagctgaacaagcgttataagta 2896
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 721 atgtatgtacaaagtttaactaaattgatgttaaattgagctgaacaagcgttataagta 780
Query: 2897 atttattatttaaataccccaagcaaatgtttttcttttttaacgaaattgttgttattg 2956
|||||||||||||| ||||||||||||||||||||||||||||||||||||||||| |||
Sbjct: 781 atttattatttaaaaaccccaagcaaatgtttttcttttttaacgaaattgttgttgttg 840
Query: 2957 tcaccaaga 2965
|||||||||
Sbjct: 841 tcaccaaga 849
Database: est
Posted date: Jul 14, 2011 2:25 PM
Number of letters in database: 8,280,457
Number of sequences in database: 9484
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.37 0.711 1.31
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Sequences: 9484
Number of Hits to DB: 268,385
Number of extensions: 4758
Number of successful extensions: 4758
Number of sequences better than 1.0e-10: 1
Number of HSP's gapped: 4756
Number of HSP's successfully gapped: 1
Length of query: 2965
Length of database: 8,280,457
Length adjustment: 18
Effective length of query: 2947
Effective length of database: 8,109,745
Effective search space: 23899418515
Effective search space used: 23899418515
X1: 11 (21.8 bits)
X2: 15 (29.7 bits)
X3: 50 (99.1 bits)
S1: 12 (24.3 bits)
S2: 34 (67.9 bits)