BLASTN 2.2.24 [Aug-08-2010]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= DPGLEAN04742 (UTR included)
(4360 letters)
Database: est
9484 sequences; 8,280,457 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
BF01056A1H06 1304 0.0
>BF01056A1H06
Length = 856
Score = 1304 bits (658), Expect = 0.0
Identities = 665/668 (99%)
Strand = Plus / Plus
Query: 1608 ctggacatatcggacaaccaagtgtcttcgttgggtgcgggagccctgacgggactgagg 1667
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 189 ctggacatatcggacaaccaagtgtcttcgttgggtgcgggagccctgacgggactgagg 248
Query: 1668 agattgcacgacctgctggtggccagaaaccgtctgagacgaatctctgcagacaccttc 1727
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 249 agattgcacgacctgctggtggccagaaaccgtctgagacgaatctctgcagacaccttc 308
Query: 1728 gtgcacacgccacgcctccagctgctagatctcgaggacaatgaaatcgagcacatcgat 1787
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 309 gtgcacacgccacgcctccagctgctagatctcgaggacaatgaaatcgagcacatcgat 368
Query: 1788 atggaagcgttcgtccccattaataaattagaagacctaaacgtggggaacaaccgcttt 1847
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 369 atggaagcgttcgtccccattaataaattagaagacctaaacgtggggaacaaccgcttt 428
Query: 1848 cctgtactccccgccagtggactgcagcgactgctgcacctaaaggctcataacaacccc 1907
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 429 cctgtactccccgccagtggactgcagcgactgctgcacctaaaggctcataacaacccc 488
Query: 1908 gcactgagacgtttccacccgcctgaggcattccccaggatacagactctagtcctatca 1967
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 489 gcactgagacgtttccacccgcctgaggcattccccaggatacagactctagtcctatca 548
Query: 1968 tacgcttaccactgctgcgagttcatgcctcttatggagggcgggtcgagctcggcgggt 2027
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 549 tacgcttaccactgctgcgagttcatgcctcttatggagggcgggtcgagctcggcgggt 608
Query: 2028 tcggcagagtcggcggaaagcggagacgaggaacccgaacagttcagcgacttggtgttg 2087
||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||
Sbjct: 609 tcggcagagtcggcggagagcggagacgaggaacccgaacagttcagcgacttggtgttg 668
Query: 2088 ctaccgccagcacacgtcgacctcgccgcctgggctaacgccacggatatttggccacat 2147
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 669 ctaccgccagcacacgtcgacctcgccgcctgggctaacgccacggatatttggccacat 728
Query: 2148 tacctgaacgcgactggtgagagtagttcccgactcgctgccgtcggctggggcgacgtc 2207
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 729 tacctgaacgcgactggtgagagtagttcccgactcgctgccgtcggctggggcgacgtc 788
Query: 2208 agcgcggccgagctcaaatacggaggcaaccgtcgcgtgcgctgcttaccactgcctgga 2267
|||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 789 agcgcggccgnnctcaaatacggaggcaaccgtcgcgtgcgctgcttaccactgcctgga 848
Query: 2268 ccgtttct 2275
||||||||
Sbjct: 849 ccgtttct 856
Score = 369 bits (186), Expect = e-101
Identities = 189/190 (99%)
Strand = Plus / Plus
Query: 1354 ccgcgctcgagcctcacgctctcacacacctgccccgacttaccacgcttgtgttgtcgg 1413
|||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||
Sbjct: 1 ccgcgctcgagcctcacgctctcacacacctgccccgacttaccacgcttgttttgtcgg 60
Query: 1414 aagcacgcggtctgagcgtttttccttccctgaacggttcctctcgcctcaacacgctcc 1473
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 61 aagcacgcggtctgagcgtttttccttccctgaacggttcctctcgcctcaacacgctcc 120
Query: 1474 gcctggaccgagctcgcctcactcgcctgccctcggacctgtgtctgcacgcgcccctcc 1533
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 121 gcctggaccgagctcgcctcactcgcctgccctcggacctgtgtctgcacgcgcccctcc 180
Query: 1534 tgagagcact 1543
||||||||||
Sbjct: 181 tgagagcact 190
Database: est
Posted date: Jul 14, 2011 2:25 PM
Number of letters in database: 8,280,457
Number of sequences in database: 9484
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.37 0.711 1.31
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Sequences: 9484
Number of Hits to DB: 361,236
Number of extensions: 6447
Number of successful extensions: 6447
Number of sequences better than 1.0e-10: 1
Number of HSP's gapped: 6445
Number of HSP's successfully gapped: 2
Length of query: 4360
Length of database: 8,280,457
Length adjustment: 18
Effective length of query: 4342
Effective length of database: 8,109,745
Effective search space: 35212512790
Effective search space used: 35212512790
X1: 11 (21.8 bits)
X2: 15 (29.7 bits)
X3: 50 (99.1 bits)
S1: 12 (24.3 bits)
S2: 35 (69.9 bits)