BLASTN 2.2.24 [Aug-08-2010]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= DPGLEAN04769 (UTR included)
(1379 letters)
Database: est
9484 sequences; 8,280,457 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
BF01056A1B08 86 2e-16
BF01025B2E05 82 3e-15
BF01012A1E04 80 1e-14
BF01052B1F12 78 4e-14
BF01042A2B06 78 4e-14
BF01012A1B09 78 4e-14
BF01011A1H06 76 2e-13
BF01049A2D11 68 4e-11
>BF01056A1B08
Length = 761
Score = 85.7 bits (43), Expect = 2e-16
Identities = 46/47 (97%)
Strand = Plus / Minus
Query: 48 agtttcatttaaatgaataaaactcgcgaaaatcttagatctcatca 94
||||||||||||||||||||||||||||||| |||||||||||||||
Sbjct: 140 agtttcatttaaatgaataaaactcgcgaaagtcttagatctcatca 94
>BF01025B2E05
Length = 759
Score = 81.8 bits (41), Expect = 3e-15
Identities = 44/45 (97%)
Strand = Plus / Plus
Query: 48 agtttcatttaaatgaataaaactcgcgaaaatcttagatctcat 92
||||||||||||||||||||||||||||||| |||||||||||||
Sbjct: 75 agtttcatttaaatgaataaaactcgcgaaagtcttagatctcat 119
>BF01012A1E04
Length = 841
Score = 79.8 bits (40), Expect = 1e-14
Identities = 43/44 (97%)
Strand = Plus / Plus
Query: 48 agtttcatttaaatgaataaaactcgcgaaaatcttagatctca 91
||||||||||||||||||||||||||||||| ||||||||||||
Sbjct: 575 agtttcatttaaatgaataaaactcgcgaaagtcttagatctca 618
>BF01052B1F12
Length = 785
Score = 77.8 bits (39), Expect = 4e-14
Identities = 45/47 (95%)
Strand = Plus / Minus
Query: 48 agtttcatttaaatgaataaaactcgcgaaaatcttagatctcatca 94
||||||||||||||||||||||||||||||| |||||||| ||||||
Sbjct: 341 agtttcatttaaatgaataaaactcgcgaaattcttagatttcatca 295
>BF01042A2B06
Length = 781
Score = 77.8 bits (39), Expect = 4e-14
Identities = 60/67 (89%)
Strand = Plus / Minus
Query: 292 taatgatatctaagactttcgcgagtattcatttaaataatattaatgttttcggattac 351
|||||| ||| ||||||||||||||||||| ||||||| | | |||| ||||||||||||
Sbjct: 373 taatgagatcaaagactttcgcgagtattcgtttaaattaaagtaatattttcggattac 314
Query: 352 tacgcgt 358
|||||||
Sbjct: 313 tacgcgt 307
>BF01012A1B09
Length = 841
Score = 77.8 bits (39), Expect = 4e-14
Identities = 45/47 (95%)
Strand = Plus / Minus
Query: 48 agtttcatttaaatgaataaaactcgcgaaaatcttagatctcatca 94
||||||||||||||||||||||||||||| | |||||||||||||||
Sbjct: 749 agtttcatttaaatgaataaaactcgcgacagtcttagatctcatca 703
>BF01011A1H06
Length = 739
Score = 75.8 bits (38), Expect = 2e-13
Identities = 41/42 (97%)
Strand = Plus / Plus
Query: 51 ttcatttaaatgaataaaactcgcgaaaatcttagatctcat 92
||||||||||||||||||| ||||||||||||||||||||||
Sbjct: 565 ttcatttaaatgaataaaagtcgcgaaaatcttagatctcat 606
>BF01049A2D11
Length = 776
Score = 67.9 bits (34), Expect = 4e-11
Identities = 34/34 (100%)
Strand = Plus / Minus
Query: 59 aatgaataaaactcgcgaaaatcttagatctcat 92
||||||||||||||||||||||||||||||||||
Sbjct: 502 aatgaataaaactcgcgaaaatcttagatctcat 469
Database: est
Posted date: Jul 14, 2011 2:25 PM
Number of letters in database: 8,280,457
Number of sequences in database: 9484
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.37 0.711 1.31
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Sequences: 9484
Number of Hits to DB: 186,032
Number of extensions: 4277
Number of successful extensions: 4277
Number of sequences better than 1.0e-10: 8
Number of HSP's gapped: 4277
Number of HSP's successfully gapped: 8
Length of query: 1379
Length of database: 8,280,457
Length adjustment: 17
Effective length of query: 1362
Effective length of database: 8,119,229
Effective search space: 11058389898
Effective search space used: 11058389898
X1: 11 (21.8 bits)
X2: 15 (29.7 bits)
X3: 50 (99.1 bits)
S1: 12 (24.3 bits)
S2: 34 (67.9 bits)