BLASTN 2.2.24 [Aug-08-2010]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= DPGLEAN04778 (UTR included)
(1834 letters)
Database: est
9484 sequences; 8,280,457 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
BF01048A1A03 456 e-128
BF01017A1C03 448 e-125
>BF01048A1A03
Length = 819
Score = 456 bits (230), Expect = e-128
Identities = 233/234 (99%)
Strand = Plus / Plus
Query: 1150 ctgtggagccaatccattctcccccgttctcccctccccccagtctccctcccctcccca 1209
||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||
Sbjct: 142 ctgtggagccaatccattctcccccgttctcccctccccccagcctccctcccctcccca 201
Query: 1210 cccccggtgcactccattccgaactctatcgtataagcacaaagcacatagcgtgttgcc 1269
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 202 cccccggtgcactccattccgaactctatcgtataagcacaaagcacatagcgtgttgcc 261
Query: 1270 gagagcggcgtgttgtgtgcgcgtgtactaacgcggtcggtaggtggcgcgcaagctcgt 1329
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 262 gagagcggcgtgttgtgtgcgcgtgtactaacgcggtcggtaggtggcgcgcaagctcgt 321
Query: 1330 gctgatggagacggacctcgagcgggccgaggagagggcggagcagagcgagtg 1383
||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 322 gctgatggagacggacctcgagcgggccgaggagagggcggagcagagcgagtg 375
Score = 153 bits (77), Expect = 1e-36
Identities = 83/85 (97%)
Strand = Plus / Plus
Query: 1064 cgctctcggcctctcgctttgtgtgatctctggcctgtggagccaatccattctcccccg 1123
|||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||
Sbjct: 108 cgctctcggcctctcgctttgtgtgatctccggcctgtggagccaatccattctcccccg 167
Query: 1124 atctcccctccccccagcctccctc 1148
||||||||||||||||||||||||
Sbjct: 168 ttctcccctccccccagcctccctc 192
>BF01017A1C03
Length = 835
Score = 448 bits (226), Expect = e-125
Identities = 229/230 (99%)
Strand = Plus / Plus
Query: 645 gccgagtccgaggtcgcagctcttaacagacgcatccaattgctggaggaggaccttgag 704
||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||
Sbjct: 25 gccgagtccgaggtcgcagctcttaacagacgcatccaactgctggaggaggaccttgag 84
Query: 705 aggtctgaggagcgtctcgccaccgctaccgctaagctcgccgaggccagccaggcagct 764
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 85 aggtctgaggagcgtctcgccaccgctaccgctaagctcgccgaggccagccaggcagct 144
Query: 765 gatgagtccgaacgaatacgcaaggcgttggagaatcgtaccaatatggaggacgaccgc 824
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 145 gatgagtccgaacgaatacgcaaggcgttggagaatcgtaccaatatggaggacgaccgc 204
Query: 825 gtcgccattttggaagctcaactgtcacaggcgaagctcatcgctgagga 874
||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 205 gtcgccattttggaagctcaactgtcacaggcgaagctcatcgctgagga 254
Score = 145 bits (73), Expect = 3e-34
Identities = 73/73 (100%)
Strand = Plus / Plus
Query: 1311 aggtggcgcgcaagctcgtgctgatggagacggacctcgagcgggccgaggagagggcgg 1370
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 275 aggtggcgcgcaagctcgtgctgatggagacggacctcgagcgggccgaggagagggcgg 334
Query: 1371 agcagagcgagtg 1383
|||||||||||||
Sbjct: 335 agcagagcgagtg 347
Database: est
Posted date: Jul 14, 2011 2:25 PM
Number of letters in database: 8,280,457
Number of sequences in database: 9484
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.37 0.711 1.31
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Sequences: 9484
Number of Hits to DB: 179,845
Number of extensions: 3939
Number of successful extensions: 3939
Number of sequences better than 1.0e-10: 2
Number of HSP's gapped: 3939
Number of HSP's successfully gapped: 4
Length of query: 1834
Length of database: 8,280,457
Length adjustment: 17
Effective length of query: 1817
Effective length of database: 8,119,229
Effective search space: 14752639093
Effective search space used: 14752639093
X1: 11 (21.8 bits)
X2: 15 (29.7 bits)
X3: 50 (99.1 bits)
S1: 12 (24.3 bits)
S2: 34 (67.9 bits)