BLASTN 2.2.24 [Aug-08-2010]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= DPGLEAN04783 (UTR included)
(2302 letters)
Database: est
9484 sequences; 8,280,457 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
BF01043B1H06 1608 0.0
BF01016B2A06 1261 0.0
BF14_1984_C1 565 e-160
>BF01043B1H06
Length = 844
Score = 1608 bits (811), Expect = 0.0
Identities = 837/845 (99%), Gaps = 1/845 (0%)
Strand = Plus / Plus
Query: 391 gaaacatacatttgcgtcgtattaacaaaaaaatacatttttcccaactcacggccaacc 450
|||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||
Sbjct: 1 gaaacatacatttgcgtcgtattaacaaaa-aatacatttttcccaactcacggccaacc 59
Query: 451 aaagcgtcaaggtgtctgtttcaagcagcgtgttgcctggtgccatcactatgaagatgc 510
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 60 aaagcgtcaaggtgtctgtttcaagcagcgtgttgcctggtgccatcactatgaagatgc 119
Query: 511 tgtcacctcatgatggaccagatatctcgccagtcgagtccgctggtgaatggcacagcc 570
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 120 tgtcacctcatgatggaccagatatctcgccagtcgagtccgctggtgaatggcacagcc 179
Query: 571 ccacattctgggtgctggtggttggagcgtcagcgctggttgctgtcgtgattgctgtgg 630
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 180 ccacattctgggtgctggtggttggagcgtcagcgctggttgctgtcgtgattgctgtgc 239
Query: 631 tcgcttgctgggtcgctcgcagacgggcatcgcttgctcacaaacttggtggtaagcgtg 690
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 240 tcgcttgctgggtcgctcgcagacgggcatcgcttgctcacaaacttggtggtaagcgtg 299
Query: 691 gtccggacaaggcgttggtcttccaacctccgcgccgagcgaccgctgttcgctctcctg 750
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 300 gtccggacaaggcgttggtcttccaacctccgcgccgagcgaccgctgttcgctctcctg 359
Query: 751 gctccgctacccattatcttcgcaagtcaccctcaccaacggccgccgcacccccagcgt 810
|||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 360 gctccgctactcattatcttcgcaagtcaccctcaccaacggccgccgcacccccagcgt 419
Query: 811 cttccccgcctcagccgcaaccaccagctacagtcgttgttgcgtcgggcggcaacagcc 870
||||||| |||||||| |||||||||||||||||||||||||||||||||||||||||||
Sbjct: 420 cttccccacctcagcctcaaccaccagctacagtcgttgttgcgtcgggcggcaacagcc 479
Query: 871 ctcatactccaactgcccctgaaccagctcctctcagcaaggagttagctgatgccaacg 930
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 480 ctcatactccaactgcccctgaaccagctcctctcagcaaggagttagctgatgccaacg 539
Query: 931 ccactgagaagcccaagccttccgaaccagagagcaacaacagcagcctcggagatttgc 990
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 540 ccactgagaagcccaagccttccgaaccagagagcaacaacagcagcctcggagatttgc 599
Query: 991 actttaaactgagacatgacaatgagaagagcgctctggttgtgtccgtggtgtcctgcc 1050
||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||
Sbjct: 600 actttaaactgagacatgacaatgagaagagtgctctggttgtgtccgtggtgtcctgcc 659
Query: 1051 agggtctcccaggtcgtgagccagctgggcccgacccttacgtgaagctgcaacttctgc 1110
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 660 agggtctcccaggtcgtgagccagctgggcccgacccttacgtgaagctgcaacttctgc 719
Query: 1111 cggacaaacagcacaaagttaagaccagggttgtccgaaagacccgttgtccagtctacg 1170
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 720 cggacaaacagcacaaagttaagaccagggttgtccgaaagacccgttgtccagtctacg 779
Query: 1171 atgaagacttcaccttctacggtatcgctccacatgaactcgcttccatcaccctacact 1230
|||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 780 atgannacttcaccttctacggtatcgctccacatgaactcgcttccatcaccctacact 839
Query: 1231 ttgta 1235
|||||
Sbjct: 840 ttgta 844
>BF01016B2A06
Length = 673
Score = 1261 bits (636), Expect = 0.0
Identities = 663/673 (98%)
Strand = Plus / Plus
Query: 1314 tccggagaggccatggccctctgccgcgaaatacagccaagaagtttgaagatgcgttcc 1373
||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||
Sbjct: 1 tccggagaggccatggccctctgccgcgaaatacaaccaagaagtttgaagatgcgttcc 60
Query: 1374 gttggtcgtggtgaagtgctggtgtctttgtgctggcagccagctgcagcccgtctgacc 1433
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 61 gttggtcgtggtgaagtgctggtgtctttgtgctggcagccagctgcagcccgtctgacc 120
Query: 1434 gtagtactcctgaaggctcgcaatctgccaaagatggacgtcacaggactcgctgatcct 1493
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 121 gtagtactcctgaaggctcgcaatctgccaaagatggacgtcacaggactcgctgatcct 180
Query: 1494 tatgtaaagatgtatctgctgtacaacggtcaacgcatcgccaagaagaaaactcatgta 1553
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 181 tatgtaaagatgtatctgctgtacaacggtcaacgcatcgccaagaagaaaactcatgta 240
Query: 1554 aagaagcgcactctgaatccagttttcaacgagtctttcgtctttgaagtgccggctgct 1613
|||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||
Sbjct: 241 aagaagcgcactctgaatccagttttcaacgagtcttttgtctttgaagtgccggctgct 300
Query: 1614 cctaacgccacgctcgaccacgtctctctggaactgctggtcctcgactgggatagggtc 1673
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 301 cctaacgccacgctcgaccacgtctctctggaactgctggtcctcgactgggatagggtc 360
Query: 1674 actaagaacgaggtgatcggacggttggaacttggttcggaaggtgtcggaagcgcacga 1733
||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||
Sbjct: 361 actaagaacgaggtgatcggacggttggagcttggttcggaaggtgtcggaagcgcacga 420
Query: 1734 caccactggcgcgaggtgcaggcggccccacgacgacagatcgccgactggcacaaactc 1793
|||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 421 caccactggcgcgaagtgcaggcggccccacgacgacagatcgccgactggcacaaactc 480
Query: 1794 aaggagtgaaccgcttaaatactcctctcccctccacgcacccgccttcccctcacaacc 1853
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 481 aaggagtgaaccgcttaaatactcctctcccctccacgcacccgccttcccctcacaacc 540
Query: 1854 gtgctgtattaaacccattgtgtaacacattttacacatactgtgaaaaggataacttta 1913
||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||
Sbjct: 541 gtgctgtattaaacccattacgtaacacattttacacatactgtgaaaaggataacttta 600
Query: 1914 catacaaatttagtcttctagaagttgttttcgttaattttgcctaaattgtttaacaaa 1973
|||| ||||||||||||||||||||||||||||||||||||||||||||||||| |||
Sbjct: 601 catannnatttagtcttctagaagttgttttcgttaattttgcctaaattgtttaaaaaa 660
Query: 1974 ttgcttcttaaaa 1986
|||||||||||||
Sbjct: 661 ttgcttcttaaaa 673
>BF14_1984_C1
Length = 1884
Score = 565 bits (285), Expect = e-160
Identities = 291/293 (99%)
Strand = Plus / Plus
Query: 2010 aataacaacgatgtaatattttagattacagtaacttctacctacctcttcccatcccta 2069
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1 aataacaacgatgtaatattttagattacagtaacttctacctacctcttcccatcccta 60
Query: 2070 tcccactaaagccttttttctgcacaaattcattactttcctacattaagaaatattaga 2129
|||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 61 gcccacttaagccttttttctgcacaaattcattactttcctacattaagaaatattaga 120
Query: 2130 tcggataaaaactttcatataacaagaaaactattaaaggaaatgtagccaagatatgcc 2189
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 121 tcggataaaaactttcatataacaagaaaactattaaaggaaatgtagccaagatatgcc 180
Query: 2190 ttgaaaactattaattcatttgtactctacattgcaatactcactcgaacttataaaata 2249
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 181 ttgaaaactattaattcatttgtactctacattgcaatactcactcgaacttataaaata 240
Query: 2250 tttaaaataatgttcatcagcgacgggtaagtggaaaaaatttagccaaaatc 2302
|||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 241 tttaaaataatgttcatcagcgacgggtaagtggaaaaaatttagccaaaatc 293
Database: est
Posted date: Jul 14, 2011 2:25 PM
Number of letters in database: 8,280,457
Number of sequences in database: 9484
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.37 0.711 1.31
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Sequences: 9484
Number of Hits to DB: 213,535
Number of extensions: 4185
Number of successful extensions: 4185
Number of sequences better than 1.0e-10: 3
Number of HSP's gapped: 4182
Number of HSP's successfully gapped: 3
Length of query: 2302
Length of database: 8,280,457
Length adjustment: 17
Effective length of query: 2285
Effective length of database: 8,119,229
Effective search space: 18552438265
Effective search space used: 18552438265
X1: 11 (21.8 bits)
X2: 15 (29.7 bits)
X3: 50 (99.1 bits)
S1: 12 (24.3 bits)
S2: 34 (67.9 bits)