BLASTN 2.2.24 [Aug-08-2010]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= DPGLEAN04804 (UTR included)
(4750 letters)
Database: est
9484 sequences; 8,280,457 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
BF01049B1F01 115 7e-25
BF14_335_C4 115 7e-25
BF01019A1H08 113 3e-24
BF14_335_C2 98 2e-19
BF01016B1E06 92 1e-17
BF01016A2B02 86 6e-16
BF14_335_C5 78 1e-13
BF01014B2F02 74 2e-12
>BF01049B1F01
Length = 840
Score = 115 bits (58), Expect = 7e-25
Identities = 61/62 (98%)
Strand = Plus / Minus
Query: 2727 ggccccttaaacctacacctgggtcgcaagtcccaggcactgttgaagctcctctccctg 2786
||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 651 ggccccttacacctacacctgggtcgcaagtcccaggcactgttgaagctcctctccctg 592
Query: 2787 ca 2788
||
Sbjct: 591 ca 590
>BF14_335_C4
Length = 1491
Score = 115 bits (58), Expect = 7e-25
Identities = 58/58 (100%)
Strand = Plus / Plus
Query: 2726 aggccccttaaacctacacctgggtcgcaagtcccaggcactgttgaagctcctctcc 2783
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1245 aggccccttaaacctacacctgggtcgcaagtcccaggcactgttgaagctcctctcc 1302
>BF01019A1H08
Length = 504
Score = 113 bits (57), Expect = 3e-24
Identities = 60/61 (98%)
Strand = Plus / Minus
Query: 2728 gccccttaaacctacacctgggtcgcaagtcccaggcactgttgaagctcctctccctgc 2787
|||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||
Sbjct: 482 gccccttaaacctacacctgggtcgcaactcccaggcactgttgaagctcctctccctgc 423
Query: 2788 a 2788
|
Sbjct: 422 a 422
>BF14_335_C2
Length = 1827
Score = 97.6 bits (49), Expect = 2e-19
Identities = 55/57 (96%)
Strand = Plus / Minus
Query: 2732 cttaaacctacacctgggtcgcaagtcccaggcactgttgaagctcctctccctgca 2788
|||||||||||||||| ||||||| ||||||||||||||||||||||||||||||||
Sbjct: 922 cttaaacctacacctgtgtcgcaaatcccaggcactgttgaagctcctctccctgca 866
>BF01016B1E06
Length = 606
Score = 91.7 bits (46), Expect = 1e-17
Identities = 58/62 (93%)
Strand = Plus / Minus
Query: 2727 ggccccttaaacctacacctgggtcgcaagtcccaggcactgttgaagctcctctccctg 2786
||||||||||||||||||||||||||| | |||| ||||||||||||||||||||| |||
Sbjct: 256 ggccccttaaacctacacctgggtcgctactccccggcactgttgaagctcctctctctg 197
Query: 2787 ca 2788
||
Sbjct: 196 ca 195
>BF01016A2B02
Length = 780
Score = 85.7 bits (43), Expect = 6e-16
Identities = 55/59 (93%)
Strand = Plus / Minus
Query: 2727 ggccccttaaacctacacctgggtcgcaagtcccaggcactgttgaagctcctctccct 2785
|||| ||||| |||||||||| ||||||| |||||||||||||||||||||||||||||
Sbjct: 288 ggcctcttaagcctacacctgagtcgcaattcccaggcactgttgaagctcctctccct 230
>BF14_335_C5
Length = 1597
Score = 77.8 bits (39), Expect = 1e-13
Identities = 52/58 (89%)
Strand = Plus / Plus
Query: 2731 ccttaaacctacacctgggtcgcaagtcccaggcactgttgaagctcctctccctgca 2788
|||||||||||||| |||||||||||||||||||||||||||||||||| ||||
Sbjct: 1498 ccttaaacctacacnnnnntcgcaagtcccaggcactgttgaagctcctctccgtgca 1555
>BF01014B2F02
Length = 623
Score = 73.8 bits (37), Expect = 2e-12
Identities = 46/49 (93%)
Strand = Plus / Minus
Query: 2740 tacacctgggtcgcaagtcccaggcactgttgaagctcctctccctgca 2788
|||||||||||||||||||| |||| ||| |||||||||||||||||||
Sbjct: 623 tacacctgggtcgcaagtcctaggcgctgctgaagctcctctccctgca 575
Database: est
Posted date: Jul 14, 2011 2:25 PM
Number of letters in database: 8,280,457
Number of sequences in database: 9484
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.37 0.711 1.31
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Sequences: 9484
Number of Hits to DB: 403,232
Number of extensions: 15163
Number of successful extensions: 15163
Number of sequences better than 1.0e-10: 8
Number of HSP's gapped: 15163
Number of HSP's successfully gapped: 8
Length of query: 4750
Length of database: 8,280,457
Length adjustment: 18
Effective length of query: 4732
Effective length of database: 8,109,745
Effective search space: 38375313340
Effective search space used: 38375313340
X1: 11 (21.8 bits)
X2: 15 (29.7 bits)
X3: 50 (99.1 bits)
S1: 12 (24.3 bits)
S2: 35 (69.9 bits)