BLASTN 2.2.24 [Aug-08-2010]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= DPGLEAN04818 (UTR included)
(1462 letters)
Database: est
9484 sequences; 8,280,457 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
BF01047B2H03 107 5e-23
BF01037A2H12 105 2e-22
BF01060B1D11 101 3e-21
BF14_335_C2 92 3e-18
BF01031B2E06 68 4e-11
>BF01047B2H03
Length = 758
Score = 107 bits (54), Expect = 5e-23
Identities = 78/86 (90%)
Strand = Plus / Minus
Query: 533 aacttgctacatctgcgggaaggcagttggaactgctaagcatttgctggtgggatgtag 592
||||||||| ||||||| | |||||||||||| |||| ||||||||||| ||||||||||
Sbjct: 365 aacttgctatatctgcgaggaggcagttggaattgctgagcatttgctgatgggatgtag 306
Query: 593 ggtactcctggatagcggccaatact 618
| |||||||||||||||| |||||||
Sbjct: 305 gctactcctggatagcggtcaatact 280
>BF01037A2H12
Length = 773
Score = 105 bits (53), Expect = 2e-22
Identities = 96/109 (88%), Gaps = 1/109 (0%)
Strand = Plus / Plus
Query: 775 ttgtaaatttgtacgcggtagaagtaggagttagaggtatgacagccaaatctctctaca 834
|||| |||||||||| |||| ||||||||| |||||||| | ||||||||||||| |||
Sbjct: 666 ttgtgaatttgtacgaggtaaaagtaggagcgagaggtataaaagccaaatctctcgaca 725
Query: 835 acctgctaaaagacttaggtctgccaagaactaacatcagttcattctt 883
|||||||||||||||| | |||||||| |||||||||||||||||||
Sbjct: 726 acctgctaaaagactt-gccttgccaagagctaacatcagttcattctt 773
>BF01060B1D11
Length = 799
Score = 101 bits (51), Expect = 3e-21
Identities = 69/75 (92%)
Strand = Plus / Minus
Query: 524 taccgaaaaaacttgctacatctgcgggaaggcagttggaactgctaagcatttgctggt 583
|||||||||||||||||| || |||| |||||||||||||| |||||||||||||||| |
Sbjct: 193 taccgaaaaaacttgctatatttgcgagaaggcagttggaattgctaagcatttgctgat 134
Query: 584 gggatgtagggtact 598
|||||||||| ||||
Sbjct: 133 gggatgtaggctact 119
>BF14_335_C2
Length = 1827
Score = 91.7 bits (46), Expect = 3e-18
Identities = 73/82 (89%)
Strand = Plus / Minus
Query: 669 ctaatagagctcacggttccttgggaaaacaatatccccaaacaccatgccatgaaggtc 728
|||||||||| |||||||||||| | | ||| ||||||||| |||||||||| ||||||
Sbjct: 1239 ctaatagagcctacggttccttggaagaccaacatccccaaaaaccatgccatcaaggtc 1180
Query: 729 aacaagtattacgagctcacta 750
||||||||||| ||||||||||
Sbjct: 1179 aacaagtattatgagctcacta 1158
>BF01031B2E06
Length = 707
Score = 67.9 bits (34), Expect = 4e-11
Identities = 76/90 (84%)
Strand = Plus / Plus
Query: 756 ctcactaagaatatgttcgttgtaaatttgtacgcggtagaagtaggagttagaggtatg 815
||||||||||||| |||||| | ||||||||||||||||||||| |||| || | | |
Sbjct: 488 ctcactaagaataggttcgtggcaaatttgtacgcggtagaagtgggagcgagcgttgta 547
Query: 816 acagccaaatctctctacaacctgctaaaa 845
| ||| ||||||||| ||||||| ||||||
Sbjct: 548 aaagctaaatctctccacaacctactaaaa 577
Database: est
Posted date: Jul 14, 2011 2:25 PM
Number of letters in database: 8,280,457
Number of sequences in database: 9484
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.37 0.711 1.31
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Sequences: 9484
Number of Hits to DB: 187,568
Number of extensions: 3721
Number of successful extensions: 3721
Number of sequences better than 1.0e-10: 5
Number of HSP's gapped: 3720
Number of HSP's successfully gapped: 6
Length of query: 1462
Length of database: 8,280,457
Length adjustment: 17
Effective length of query: 1445
Effective length of database: 8,119,229
Effective search space: 11732285905
Effective search space used: 11732285905
X1: 11 (21.8 bits)
X2: 15 (29.7 bits)
X3: 50 (99.1 bits)
S1: 12 (24.3 bits)
S2: 34 (67.9 bits)