BLASTN 2.2.24 [Aug-08-2010]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= DPGLEAN04839 (UTR included)
(4522 letters)
Database: est
9484 sequences; 8,280,457 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
BF01041A2F12 1564 0.0
BF01018B1H05 151 1e-35
>BF01041A2F12
Length = 826
Score = 1564 bits (789), Expect = 0.0
Identities = 816/826 (98%)
Strand = Plus / Plus
Query: 1693 acggtgcaccagctgcgaaacaggtgaagaagaccccacaacaagcggtcacacatgaca 1752
||||||| |||||||||||||||||||||||| |||||||||||||||||||||||||
Sbjct: 1 acggtgcgccagctgcgaaacaggtgaagaagnnnccacaacaagcggtcacacatgaca 60
Query: 1753 acaacaacatggccgcctggaagaaacctaggggcccgccgacggtgcagccgcggccgg 1812
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 61 acaacaacatggccgcctggaagaaacctaggggcccgccgacggtgcagccgcggccgg 120
Query: 1813 tggcagggcagccggggacgacgacaccgccggcgcagctcgcacagcacacacagcccg 1872
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 121 tggcagggcagccggggacgacgacaccgccggcgcagctcgcacagcacacacagcccg 180
Query: 1873 cgagcctcgcacaagccgctcatcacgtgcagcctgtgcaaccagcccagcacatacagc 1932
||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||
Sbjct: 181 cgagcctcgcacaagccgctcatcacgtgcagcctgtgctaccagcccagcacatacagc 240
Query: 1933 ctatccaccccgcccccgcacccgcccacgccccgcatcagatatccgttccccggccgc 1992
||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||
Sbjct: 241 ctatccaccccgcccccgcacccgcccacaccccgcatcagatatccgttccccggccgc 300
Query: 1993 agctcacaccggacagagatgtaccgcctcccttacaccatcagaaccgtcagatccaac 2052
||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||
Sbjct: 301 agctcacaccggacagagatgtaccgcctcccttacatcatcagaaccgtcagatccaac 360
Query: 2053 agccgtgttccatgacgtgcgggacgggtgtgccgtcgttggcctgcgaggcctgcctct 2112
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 361 agccgtgttccatgacgtgcgggacgggtgtgccgtcgttggcctgcgaggcctgcctct 420
Query: 2113 gtttgtaccacccggcctgtgtggggctccgtctgccgcaggacacgttcctgtgtaaga 2172
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 421 gtttgtaccacccggcctgtgtggggctccgtctgccgcaggacacgttcctgtgtaaga 480
Query: 2173 actgtcgtaagacttcatctccgccggtggagcccccgcccctcacccacaagtcgggcg 2232
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 481 actgtcgtaagacttcatctccgccggtggagcccccgcccctcacccacaagtcgggcg 540
Query: 2233 tgacgtcactaccggccggagctggccccggggctccgtgctcgtccagcgccaggcgcc 2292
||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||
Sbjct: 541 tgacgtcactaccggccggagctggccccggggctccatgctcgtccagcgccaggcgcc 600
Query: 2293 ttccggtcccagtcccagtaccagtaccgaaatcgagaaatgacaagcgagtgctcttga 2352
||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 601 ttccggtcccagttccagtaccagtaccgaaatcgagaaatgacaagcgagtgctcttga 660
Query: 2353 gaatgaaggttgcgggcggcggtcctgatggcgagcgtgtgtggtccgtggccaagccgg 2412
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 661 gaatgaaggttgcgggcggcggtcctgatggcgagcgtgtgtggtccgtggccaagccgg 720
Query: 2413 gcgctccggccccggctccgccccccgctccgccccactccgcgcccacaccccctccgt 2472
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 721 gcgctccggccccggctccgccccccgctccgccccactccgcgcccacaccccctccgt 780
Query: 2473 ccaatccccccaccaccacctgccggccttcattaccacagtcgct 2518
||||||||||||||||||||||||||||||||||||| ||||||||
Sbjct: 781 ccaatccccccaccaccacctgccggccttcattacctcagtcgct 826
>BF01018B1H05
Length = 403
Score = 151 bits (76), Expect = 1e-35
Identities = 76/76 (100%)
Strand = Plus / Plus
Query: 3894 caggttgaaattctacccatcccgaccctccagcggttgctggcggctcagctgccgcgg 3953
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 328 caggttgaaattctacccatcccgaccctccagcggttgctggcggctcagctgccgcgg 387
Query: 3954 accaagctcaagctgc 3969
||||||||||||||||
Sbjct: 388 accaagctcaagctgc 403
Database: est
Posted date: Jul 14, 2011 2:25 PM
Number of letters in database: 8,280,457
Number of sequences in database: 9484
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.37 0.711 1.31
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Sequences: 9484
Number of Hits to DB: 412,653
Number of extensions: 7843
Number of successful extensions: 7843
Number of sequences better than 1.0e-10: 2
Number of HSP's gapped: 7842
Number of HSP's successfully gapped: 2
Length of query: 4522
Length of database: 8,280,457
Length adjustment: 18
Effective length of query: 4504
Effective length of database: 8,109,745
Effective search space: 36526291480
Effective search space used: 36526291480
X1: 11 (21.8 bits)
X2: 15 (29.7 bits)
X3: 50 (99.1 bits)
S1: 12 (24.3 bits)
S2: 35 (69.9 bits)