BLASTN 2.2.24 [Aug-08-2010]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= DPGLEAN04841 (UTR included)
(2611 letters)
Database: est
9484 sequences; 8,280,457 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
BF01049A2F10 1376 0.0
BF01030B2A12 262 3e-69
>BF01049A2F10
Length = 773
Score = 1376 bits (694), Expect = 0.0
Identities = 709/714 (99%)
Strand = Plus / Plus
Query: 500 aatgggtaacactagcaaaaagctggcagcaaaatgtgctctgctaactaaggaggagca 559
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 59 aatgggtaacactagcaaaaagctggcagcaaaatgtgctctgctaactaaggaggagca 118
Query: 560 gaagtatgttgcggcaacattcagggcagccagcaagaactcggagagaataagggaaga 619
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 119 gaagtatgttgcggcaacattcagggcagccagcaagaactcggagagaataagggaaga 178
Query: 620 ggacctcatcaagttttggggtccgcaaattgatccgaggttggctcaatatctcaccaa 679
||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||
Sbjct: 179 ggacctcatcaagttttggggcccgcaaattgatccgaggttggctcaatatctcaccaa 238
Query: 680 ttttctcttcggctgcggtcaacagaaaacagccacagtggattttaacaggttcgctga 739
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 239 ttttctcttcggctgcggtcaacagaaaacagccacagtggattttaacaggttcgctga 298
Query: 740 gctctacgtctacaatgttagaggcactgtcgaggagagaatgatggtgacatataactg 799
||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||
Sbjct: 299 gctctacgtctacaatgttagaggcactgtcgaggagagaatgatggtgacatataattg 358
Query: 800 tctaggtatggattacaatgaagacgccgagttgccctatcaacttttaaaagagtattg 859
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 359 tctaggtatggattacaatgaagacgccgagttgccctatcaacttttaaaagagtattg 418
Query: 860 cgagagcatagtgtcgacgtacatgaagatagttaagtcttcgtcgacgaaacgcgcgtc 919
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 419 cgagagcatagtgtcgacgtacatgaagatagttaagtcttcgtcgacgaaacgcgcgtc 478
Query: 920 cacgtggttggagaaaggtttcagggcgagcgcctcgcacgtccaaagtctaggtgaggc 979
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 479 cacgtggttggagaaaggtttcagggcgagcgcctcgcacgtccaaagtctaggtgaggc 538
Query: 980 ggtcgcggctaccatcggggacttggagacggcgcagcatcattgtacagcaacccaact 1039
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 539 ggtcgcggctaccatcggggacttggagacggcgcagcatcattgtacagcaacccaact 598
Query: 1040 gtctaaatggttgcaatccaacatccttctgaagcagctggcggagctagtgtacgtgaa 1099
|||||| |||||||||||||||||||||||||||||||| ||||||||||||||||||||
Sbjct: 599 gtctaagtggttgcaatccaacatccttctgaagcagctcgcggagctagtgtacgtgaa 658
Query: 1100 cctgtatggtattaacagacgtggtggtgacgagagccccactcccatgccaccagccgc 1159
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 659 cctgtatggtattaacagacgtggtggtgacgagagccccactcccatgccaccagccgc 718
Query: 1160 gccatctttgctgccggcagttgaaggcttggaggcaatgccggactaccccgc 1213
||||||||||||||||||||||||||| ||||||||||||||||||||||||||
Sbjct: 719 gccatctttgctgccggcagttgaagggttggaggcaatgccggactaccccgc 772
>BF01030B2A12
Length = 454
Score = 262 bits (132), Expect = 3e-69
Identities = 132/132 (100%)
Strand = Plus / Plus
Query: 498 agaatgggtaacactagcaaaaagctggcagcaaaatgtgctctgctaactaaggaggag 557
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 86 agaatgggtaacactagcaaaaagctggcagcaaaatgtgctctgctaactaaggaggag 145
Query: 558 cagaagtatgttgcggcaacattcagggcagccagcaagaactcggagagaataagggaa 617
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 146 cagaagtatgttgcggcaacattcagggcagccagcaagaactcggagagaataagggaa 205
Query: 618 gaggacctcatc 629
||||||||||||
Sbjct: 206 gaggacctcatc 217
Score = 75.8 bits (38), Expect = 3e-13
Identities = 38/38 (100%)
Strand = Plus / Plus
Query: 1 tccttttttatccttgtgaagaacttattatacataag 38
||||||||||||||||||||||||||||||||||||||
Sbjct: 50 tccttttttatccttgtgaagaacttattatacataag 87
Database: est
Posted date: Jul 14, 2011 2:25 PM
Number of letters in database: 8,280,457
Number of sequences in database: 9484
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.37 0.711 1.31
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Sequences: 9484
Number of Hits to DB: 278,127
Number of extensions: 5348
Number of successful extensions: 5348
Number of sequences better than 1.0e-10: 2
Number of HSP's gapped: 5348
Number of HSP's successfully gapped: 3
Length of query: 2611
Length of database: 8,280,457
Length adjustment: 17
Effective length of query: 2594
Effective length of database: 8,119,229
Effective search space: 21061280026
Effective search space used: 21061280026
X1: 11 (21.8 bits)
X2: 15 (29.7 bits)
X3: 50 (99.1 bits)
S1: 12 (24.3 bits)
S2: 34 (67.9 bits)