BLASTN 2.2.24 [Aug-08-2010]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= DPGLEAN04919 (UTR included)
(5266 letters)
Database: est
9484 sequences; 8,280,457 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
BF01047A1G07 1326 0.0
>BF01047A1G07
Length = 722
Score = 1326 bits (669), Expect = 0.0
Identities = 687/693 (99%)
Strand = Plus / Plus
Query: 3792 gtgtacagcaagcgcatcctggaagccgtgcagcatctggacgagtcccgggacgagaag 3851
||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 30 gtgtacagcaagcgcgtcctggaagccgtgcagcatctggacgagtcccgggacgagaag 89
Query: 3852 ctccgctccgccaaggccgtgggccgggcgttggaatccaccgtcaggagctacgagccc 3911
||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||
Sbjct: 90 ctccgctccgccaaggccgtgggccgggcgttggagtccaccgtcaggagctacgagccc 149
Query: 3912 aaactcagacaactcacattcaaatggcagagaggactcaaaataggcgctggcaccttc 3971
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 150 aaactcagacaactcacattcaaatggcagagaggactcaaaataggcgctggcaccttc 209
Query: 3972 ggaaaggtgtacacggtggtgaacacggagagtggccaggtgctggccatgaaggagctg 4031
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 210 ggaaaggtgtacacggtggtgaacacggagagtggccaggtgctggccatgaaggagctg 269
Query: 4032 agtgtgggcgcgggggaccggcgggcgctgcagcgggcggccaacgagctcagggtgctg 4091
||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 270 agtgtgggcgcaggggaccggcgggcgctgcagcgggcggccaacgagctcagggtgctg 329
Query: 4092 gagggagccgtccacccacacctcgtgcgctactacggctgcgaactgcaccgggaggag 4151
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 330 gagggagccgtccacccacacctcgtgcgctactacggctgcgaactgcaccgggaggag 389
Query: 4152 atgttgatcttcatggagctgtgcgtggagggctcgctggaggctctggtggccacttcc 4211
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 390 atgttgatcttcatggagctgtgcgtggagggctcgctggaggctctggtggccacttcc 449
Query: 4212 ggtccactggcggagcacaccacccgccgctacaccaagcaactggtcagcgccgtctcc 4271
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 450 ggtccactggcggagcacaccacccgccgctacaccaagcaactggtcagcgccgtctcc 509
Query: 4272 gagctacacagtcggtccatcgctcacagggatattaaaagtggtaacatattcctaacg 4331
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 510 gagctacacagtcggtccatcgctcacagggatattaaaagtggtaacatattcctaacg 569
Query: 4332 aacgagggtcactgcctgaagctgggggacttcggatgcgccgtcaagatacgagctaac 4391
|||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||
Sbjct: 570 aacgagggtcactgcctgaagctgggtgacttcggatgcgccgtcaagatacgagctaac 629
Query: 4392 accaccgcgcccggggagctgcagggcttcgtggggacccaagcctacatggcccccgag 4451
|||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||
Sbjct: 630 accaccgcgcccggggagctgcagggcttcgtggggacccaagcttacatggcccccgag 689
Query: 4452 gtgttcatgaagtcgtcaggtcacggtcgcgcc 4484
|||||||||||||||||||||||||| ||||||
Sbjct: 690 gtgttcatgaagtcgtcaggtcacggccgcgcc 722
Database: est
Posted date: Jul 14, 2011 2:25 PM
Number of letters in database: 8,280,457
Number of sequences in database: 9484
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.37 0.711 1.31
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Sequences: 9484
Number of Hits to DB: 443,540
Number of extensions: 8922
Number of successful extensions: 8922
Number of sequences better than 1.0e-10: 1
Number of HSP's gapped: 8922
Number of HSP's successfully gapped: 1
Length of query: 5266
Length of database: 8,280,457
Length adjustment: 18
Effective length of query: 5248
Effective length of database: 8,109,745
Effective search space: 42559941760
Effective search space used: 42559941760
X1: 11 (21.8 bits)
X2: 15 (29.7 bits)
X3: 50 (99.1 bits)
S1: 12 (24.3 bits)
S2: 35 (69.9 bits)