BLASTN 2.2.24 [Aug-08-2010]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= DPGLEAN04938 (UTR included)
(3721 letters)
Database: est
9484 sequences; 8,280,457 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
BF14_159_C1 1090 0.0
BF14_2111_C1 781 0.0
BF14_159_C4 100 3e-20
>BF14_159_C1
Length = 944
Score = 1090 bits (550), Expect = 0.0
Identities = 597/609 (98%), Gaps = 4/609 (0%)
Strand = Plus / Minus
Query: 1 acaattctttgctgacttgttagagtttagaaatttgaaaaatta-tccgttttgccaga 59
|||||| ||||||||||||||||||||||||||||||||||| || ||||||||| ||||
Sbjct: 627 acaattttttgctgacttgttagagtttagaaatttgaaaaaataatccgttttgtcaga 568
Query: 60 agcatgttacaaatcccatcccaattcccatgtgaggagtatccacgagtataccagagt 119
||||| ||||||||||||||||||||||||||||||||||||||||||||||||| || |
Sbjct: 567 agcattttacaaatcccatcccaattcccatgtgaggagtatccacgagtataccggatt 508
Query: 120 gccgagagaatgtttacagtaacattataatatccagccatttcaacatgctgctctaaa 179
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 507 gccgagagaatgtttacagtaacattataatatccagccatttcaacatgctgctctaaa 448
Query: 180 taaaaactctaaatacattatagaattataactctcgaaatttccaagactagatatatt 239
||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||
Sbjct: 447 taaaaactctaaatacattatagaattataactctcgaaatttccaagactagatatttt 388
Query: 240 tttttt-acaaagtacatagcgacaaaaaaa--ctagtacttcaaatcaaaaataattgc 296
|||||| |||||||||||||||||||||||| ||||||||||||||||||||||||| |
Sbjct: 387 tttttttacaaagtacatagcgacaaaaaaaaactagtacttcaaatcaaaaataatttc 328
Query: 297 gcactcgactgattaaatgagtttaaacttaattaaaaataataagcatcgtgatataaa 356
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 327 gcactcgactgattaaatgagtttaaacttaattaaaaataataagcatcgtgatataaa 268
Query: 357 catcactagatcacaaagacctcggctagaggtccgtacagttatgaatacagtgggtcg 416
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 267 catcactagatcacaaagacctcggctagaggtccgtacagttatgaatacagtgggtcg 208
Query: 417 taaggctacctgtccagcgttatggccctaagagattaatcaaagcaaaagatctacggc 476
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 207 taaggctacctgtccagcgttatggccctaagagattaatcaaagcaaaagatctacggc 148
Query: 477 gcatatcaaatacaaatacaaaacatgctacatacagagaccgcggcgcgggctgcggcc 536
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 147 gcatatcaaatacaaatacaaaacatgctacatacagagaccgcggcgcgggctgcggcc 88
Query: 537 agcgcgttgaaacatcgagataaaaaatatgctaaaatacctactgaacaattacatagg 596
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 87 agcgcgttgaaacatcgagataaaaaatatgctaaaatacctactgaacaattacatagg 28
Query: 597 aacaatcag 605
|||||||||
Sbjct: 27 aacaatcag 19
>BF14_2111_C1
Length = 1280
Score = 781 bits (394), Expect = 0.0
Identities = 403/406 (99%)
Strand = Plus / Plus
Query: 3316 aatctatcttaacaattaaatgggattccgtagactcgcggccttacctcgacttaatcg 3375
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 2 aatctatcttaacaattaaatgggattccgtagactcgcggccttacctcgacttaatcg 61
Query: 3376 actattagttaactggccgggcgtgctcctgccttacgttttatatctagcgatactcga 3435
|||||||||||||||||||||||| |||||||||||| ||||||||||||||||||||||
Sbjct: 62 actattagttaactggccgggcgtactcctgccttacattttatatctagcgatactcga 121
Query: 3436 cgcactgccgttatagatccagtaggtggcatgctcctgtgatgtgtgacgaaacatggt 3495
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 122 cgcactgccgttatagatccagtaggtggcatgctcctgtgatgtgtgacgaaacatggt 181
Query: 3496 gtcttacttggattttataagaactttaaacgatatagtcctcggttactggagacgcga 3555
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 182 gtcttacttggattttataagaactttaaacgatatagtcctcggttactggagacgcga 241
Query: 3556 ggttgaggtcaacgcgcaattcggccggacagatttcgataaggcttttttggaatgtca 3615
|||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 242 ggttgaggtcgacgcgcaattcggccggacagatttcgataaggcttttttggaatgtca 301
Query: 3616 gcggaactcgaggaatgagaacttaatattgaaatatttagatttgtggacgtgaatagt 3675
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 302 gcggaactcgaggaatgagaacttaatattgaaatatttagatttgtggacgtgaatagt 361
Query: 3676 gagttatacagataagacattaagggactatacgagaaatattccg 3721
||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 362 gagttatacagataagacattaagggactatacgagaaatattccg 407
>BF14_159_C4
Length = 2341
Score = 99.6 bits (50), Expect = 3e-20
Identities = 50/50 (100%)
Strand = Plus / Minus
Query: 603 cagttagatcgtagtaaagcgagtcgggcccgagagcgagctcgtcgtcc 652
||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1711 cagttagatcgtagtaaagcgagtcgggcccgagagcgagctcgtcgtcc 1662
Database: est
Posted date: Jul 14, 2011 2:25 PM
Number of letters in database: 8,280,457
Number of sequences in database: 9484
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.37 0.711 1.31
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Sequences: 9484
Number of Hits to DB: 324,381
Number of extensions: 5965
Number of successful extensions: 5965
Number of sequences better than 1.0e-10: 3
Number of HSP's gapped: 5962
Number of HSP's successfully gapped: 3
Length of query: 3721
Length of database: 8,280,457
Length adjustment: 18
Effective length of query: 3703
Effective length of database: 8,109,745
Effective search space: 30030385735
Effective search space used: 30030385735
X1: 11 (21.8 bits)
X2: 15 (29.7 bits)
X3: 50 (99.1 bits)
S1: 12 (24.3 bits)
S2: 35 (69.9 bits)