BLASTN 2.2.24 [Aug-08-2010]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= DPGLEAN04940 (UTR included)
(2077 letters)
Database: est
9484 sequences; 8,280,457 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
BF01025B1B02 1558 0.0
>BF01025B1B02
Length = 834
Score = 1558 bits (786), Expect = 0.0
Identities = 801/805 (99%), Gaps = 2/805 (0%)
Strand = Plus / Plus
Query: 954 gtcgctgatataaaagctgataaaattgaagtcgaaagtgggtctggtgaagttaaaacc 1013
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1 gtcgctgatataaaagctgataaaattgaagtcgaaagtgggtctggtgaagttaaaacc 60
Query: 1014 gaaggcagtttgcaggcgagccaaatagaaattaaaacaggtctagagggggatataaag 1073
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 61 gaaggcagtttgcaggcgagccaaatagaaattaaaacaggtctagagggggatataaag 120
Query: 1074 tgcaataatataatggcgaattcatttactgttgtgtcacacgctggaaacatctcggtc 1133
|||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||
Sbjct: 121 tgcaataatataatggcgaattcatttactgttgtgtcacacgctggacacatctcggtc 180
Query: 1134 aagtcatgttatagtgacaaatcacacttcacaactctaatgggcaacattaagttggac 1193
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 181 aagtcatgttatagtgacaaatcacacttcacaactctaatgggcaacattaagttggac 240
Query: 1194 caccttcatagaactgtgaagatagacgtcatacagaaaggaaatttgagcatcaccgga 1253
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 241 caccttcatagaactgtgaagatagacgtcatacagaaaggaaatttgagcatcaccgga 300
Query: 1254 tttgctggtaatcttcaagcaacactcaagagtggcgatgttttcatgcatgcatctcaa 1313
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 301 tttgctggtaatcttcaagcaacactcaagagtggcgatgttttcatgcatgcatctcaa 360
Query: 1314 ttgactgagaaaagtagtattttcatacatgaaaaaggaaaggtggaactgttaataccg 1373
||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||
Sbjct: 361 ttgactgagaaaagtagcattttcatacatgaaaaaggaaaggtggaactgttaataccg 420
Query: 1374 aaaattttgcacaatttgccatcgacaaatttaatagcagaacaaattaaagtggatgag 1433
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 421 aaaattttgcacaatttgccatcgacaaatttaatagcagaacaaattaaagtggatgag 480
Query: 1434 aagattctgaagctcggtagatttatggatgattcacatccaaagaggtttagatatgag 1493
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 481 aagattctgaagctcggtagatttatggatgattcacatccaaagaggtttagatatgag 540
Query: 1494 aaggaaccccagaacgagttacacatagtttgtaagaatggtaaaattgaattaaaagaa 1553
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 541 aaggaaccccagaacgagttacacatagtttgtaagaatggtaaaattgaattaaaagaa 600
Query: 1554 acagatctccctttcattatatgaaaattgtagcactcatgcatttactggacttagata 1613
||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||
Sbjct: 601 acagatctccctttcattatatg--aattgtagcactcatgcatttactggacttagata 658
Query: 1614 ttgaataaatggaacttggagagatcctgttactatttcaaatgttgtttactattaaat 1673
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 659 ttgaataaatggaacttggagagatcctgttactatttcaaatgttgtttactattaaat 718
Query: 1674 gcatttaaataaatttataatctgtgtattgattctccatatactctgtaaggaattaaa 1733
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 719 gcatttaaataaatttataatctgtgtattgattctccatatactctgtaaggaattaaa 778
Query: 1734 ttatatatgccttgcattgtaatgt 1758
|||||||||||||||||||||||||
Sbjct: 779 ttatatatgccttgcattgtaatgt 803
Database: est
Posted date: Jul 14, 2011 2:25 PM
Number of letters in database: 8,280,457
Number of sequences in database: 9484
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.37 0.711 1.31
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Sequences: 9484
Number of Hits to DB: 328,030
Number of extensions: 7699
Number of successful extensions: 7699
Number of sequences better than 1.0e-10: 1
Number of HSP's gapped: 7698
Number of HSP's successfully gapped: 1
Length of query: 2077
Length of database: 8,280,457
Length adjustment: 17
Effective length of query: 2060
Effective length of database: 8,119,229
Effective search space: 16725611740
Effective search space used: 16725611740
X1: 11 (21.8 bits)
X2: 15 (29.7 bits)
X3: 50 (99.1 bits)
S1: 12 (24.3 bits)
S2: 34 (67.9 bits)