BLASTN 2.2.24 [Aug-08-2010]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= DPGLEAN04953 (UTR included)
(2548 letters)
Database: est
9484 sequences; 8,280,457 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
BF14_335_C4 117 9e-26
BF14_335_C2 100 2e-20
BF01043B1E03 82 5e-15
BF01040A2B07 78 8e-14
>BF14_335_C4
Length = 1491
Score = 117 bits (59), Expect = 9e-26
Identities = 71/75 (94%)
Strand = Plus / Minus
Query: 2093 ccaagctcctctctctacctaaccaaatatgaaacgaacctgctagggctgccttcgacg 2152
||||||||||||||||||||||||||||||||| ||| ||||||||||||||||| |||
Sbjct: 1209 ccaagctcctctctctacctaaccaaatatgaatcgatcctgctagggctgccttagact 1150
Query: 2153 cacgttccaagaatg 2167
|||||||||||||||
Sbjct: 1149 cacgttccaagaatg 1135
>BF14_335_C2
Length = 1827
Score = 99.6 bits (50), Expect = 2e-20
Identities = 97/112 (86%), Gaps = 3/112 (2%)
Strand = Plus / Plus
Query: 2093 ccaagctcctctctctacctaaccaaatatgaaacgaacctgctagggctgccttcgacg 2152
||||||||||||||| |||||||||| |||||||||||| |||| |||| |||||| |
Sbjct: 965 ccaagctcctctctc---ctaaccaaatttgaaacgaacctactagagctgtcttcgaag 1021
Query: 2153 cacgttccaagaatgaactgatgttagttcttggcaggcctaagtcttttag 2204
|||||| |||||||||||| |||||||||| | |||||| |||| ||||||
Sbjct: 1022 tacgttcgaagaatgaactggtgttagttctggacaggcccaagtattttag 1073
>BF01043B1E03
Length = 830
Score = 81.8 bits (41), Expect = 5e-15
Identities = 85/99 (85%), Gaps = 3/99 (3%)
Strand = Plus / Minus
Query: 2093 ccaagctcctctctctacctaaccaaatatgaaacgaacctgctagggctgccttcgacg 2152
||||| |||||||||||||||||||||| |||||| ||| ||||| ||||||| | |
Sbjct: 353 ccaaggtcctctctctacctaaccaaatttgaaacaaac---ctaggcctgcctttgcag 297
Query: 2153 cacgttccaagaatgaactgatgttagttcttggcaggc 2191
||||||||||||||| ||||||||||||| |||||||
Sbjct: 296 tacgttccaagaatgatttgatgttagttctgggcaggc 258
>BF01040A2B07
Length = 721
Score = 77.8 bits (39), Expect = 8e-14
Identities = 48/50 (96%), Gaps = 2/50 (4%)
Strand = Plus / Plus
Query: 610 gggggtggatg--ggggctagtcgctttggagacgttctccaaaacgtct 657
||||||||||| |||||||||||||||||||||||||||||||||||||
Sbjct: 15 gggggtggatgaaggggctagtcgctttggagacgttctccaaaacgtct 64
Database: est
Posted date: Jul 14, 2011 2:25 PM
Number of letters in database: 8,280,457
Number of sequences in database: 9484
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.37 0.711 1.31
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Sequences: 9484
Number of Hits to DB: 273,613
Number of extensions: 5995
Number of successful extensions: 5995
Number of sequences better than 1.0e-10: 4
Number of HSP's gapped: 5993
Number of HSP's successfully gapped: 4
Length of query: 2548
Length of database: 8,280,457
Length adjustment: 17
Effective length of query: 2531
Effective length of database: 8,119,229
Effective search space: 20549768599
Effective search space used: 20549768599
X1: 11 (21.8 bits)
X2: 15 (29.7 bits)
X3: 50 (99.1 bits)
S1: 12 (24.3 bits)
S2: 34 (67.9 bits)