BLASTN 2.2.24 [Aug-08-2010]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= DPGLEAN04976 (UTR included)
(1523 letters)
Database: est
9484 sequences; 8,280,457 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
BF01019A1H08 111 3e-24
BF01056B2D01 107 5e-23
BF01044B1A07 96 2e-19
BF14_335_C2 96 2e-19
BF14_335_C4 86 2e-16
BF01045B1A06 84 8e-16
BF14_335_C5 80 1e-14
BF01049B1F01 74 7e-13
BF01014B2F02 72 3e-12
BF01021A2B11 70 1e-11
BF01016B1E06 68 4e-11
>BF01019A1H08
Length = 504
Score = 111 bits (56), Expect = 3e-24
Identities = 62/64 (96%)
Strand = Plus / Plus
Query: 56 gattcaccgtgcgggtgtcgggtccatagcgttgcagggagaggagcttcaacagtgcct 115
||||||||||||||||| ||||||||| ||||||||||||||||||||||||||||||||
Sbjct: 390 gattcaccgtgcgggtgccgggtccatcgcgttgcagggagaggagcttcaacagtgcct 449
Query: 116 ggga 119
||||
Sbjct: 450 ggga 453
>BF01056B2D01
Length = 728
Score = 107 bits (54), Expect = 5e-23
Identities = 81/90 (90%)
Strand = Plus / Plus
Query: 31 agacgaaacttctcaacactccattgattcaccgtgcgggtgtcgggtccatagcgttgc 90
||||||||| |||||||| ||||| |||||||||||||||| ||||||||| | ||||
Sbjct: 77 agacgaaacctctcaacattccatgaattcaccgtgcgggtgccgggtccatcacattgc 136
Query: 91 agggagaggagcttcaacagtgcctgggac 120
|||||||||||||||||||| |||||||||
Sbjct: 137 agggagaggagcttcaacagcgcctgggac 166
>BF01044B1A07
Length = 806
Score = 95.6 bits (48), Expect = 2e-19
Identities = 78/88 (88%)
Strand = Plus / Plus
Query: 34 cgaaacttctcaacactccattgattcaccgtgcgggtgtcgggtccatagcgttgcagg 93
|||||||||||| | || || ||||||||||||||||| ||||||||| |||| |||||
Sbjct: 431 cgaaacttctcagcgttcaatggattcaccgtgcgggtggcgggtccatcgcgtggcagg 490
Query: 94 gagaggagcttcaacagtgcctgggact 121
||||||||||||||| ||| ||||||||
Sbjct: 491 gagaggagcttcaactgtgtctgggact 518
>BF14_335_C2
Length = 1827
Score = 95.6 bits (48), Expect = 2e-19
Identities = 60/64 (93%)
Strand = Plus / Plus
Query: 56 gattcaccgtgcgggtgtcgggtccatagcgttgcagggagaggagcttcaacagtgcct 115
||||||||||||||||| ||||||| ||||||||||||||||||||||||||||||||
Sbjct: 834 gattcaccgtgcgggtgccgggtccgccgcgttgcagggagaggagcttcaacagtgcct 893
Query: 116 ggga 119
||||
Sbjct: 894 ggga 897
>BF14_335_C4
Length = 1491
Score = 85.7 bits (43), Expect = 2e-16
Identities = 80/91 (87%), Gaps = 1/91 (1%)
Strand = Plus / Minus
Query: 31 agacgaaacttctcaacactccattgattcaccgtgcgggtgtcgggtccatagcgttgc 90
|||||||| ||||| || ||||| |||||||||||||| || ||| |||| |||||||
Sbjct: 1363 agacgaaaactctcagcattccatggattcaccgtgcggttgcggggaccatcgcgttgc 1304
Query: 91 agggagaggagcttcaacagtgcctgggact 121
||| |||||||||||||||||||||||||||
Sbjct: 1303 agg-agaggagcttcaacagtgcctgggact 1274
>BF01045B1A06
Length = 820
Score = 83.8 bits (42), Expect = 8e-16
Identities = 60/66 (90%)
Strand = Plus / Plus
Query: 56 gattcaccgtgcgggtgtcgggtccatagcgttgcagggagaggagcttcaacagtgcct 115
|||||||| |||||||| |||||||| | ||||||||||||||||||||||||||||||
Sbjct: 681 gattcaccatgcgggtgcggggtccattgtgttgcagggagaggagcttcaacagtgcct 740
Query: 116 gggact 121
|||||
Sbjct: 741 tggact 746
>BF14_335_C5
Length = 1597
Score = 79.8 bits (40), Expect = 1e-14
Identities = 49/52 (94%)
Strand = Plus / Minus
Query: 135 tctaacgcgcgtaaaacgcccacctccaccgtccaagctcctctctctacct 186
|||||||||| | |||||| ||||||||||||||||||||||||||||||||
Sbjct: 1489 tctaacgcgcattaaacgctcacctccaccgtccaagctcctctctctacct 1438
Score = 77.8 bits (39), Expect = 5e-14
Identities = 60/66 (90%), Gaps = 2/66 (3%)
Strand = Plus / Minus
Query: 56 gattcaccgtgcgggtgtcgggtccatagcgttgcagggagaggagcttcaacagtgcct 115
||||||||||||||||| ||||| ||| | ||||| |||||||||||||||||||||||
Sbjct: 1585 gattcaccgtgcgggtgccgggtgcat--ctttgcacggagaggagcttcaacagtgcct 1528
Query: 116 gggact 121
||||||
Sbjct: 1527 gggact 1522
>BF01049B1F01
Length = 840
Score = 73.8 bits (37), Expect = 7e-13
Identities = 37/37 (100%)
Strand = Plus / Plus
Query: 85 cgttgcagggagaggagcttcaacagtgcctgggact 121
|||||||||||||||||||||||||||||||||||||
Sbjct: 587 cgttgcagggagaggagcttcaacagtgcctgggact 623
Score = 69.9 bits (35), Expect = 1e-11
Identities = 50/55 (90%)
Strand = Plus / Plus
Query: 133 tatctaacgcgcgtaaaacgcccacctccaccgtccaagctcctctctctaccta 187
|||||||| | ||| |||| |||||||| ||||||||||||||||||||||||||
Sbjct: 653 tatctaactcccgttaaacacccacctctaccgtccaagctcctctctctaccta 707
>BF01014B2F02
Length = 623
Score = 71.9 bits (36), Expect = 3e-12
Identities = 78/91 (85%), Gaps = 2/91 (2%)
Strand = Plus / Plus
Query: 31 agacgaaacttctcaacactccattgattcaccgtgcgggtgtcgggtccatagcgttgc 90
||||||||| ||||| || || | ||| ||||||||||||| |||||||| |||||||
Sbjct: 520 agacgaaacctctcagcattcagtggatgcaccgtgcgggtgccgggtcca--gcgttgc 577
Query: 91 agggagaggagcttcaacagtgcctgggact 121
|||||||||||||||| ||| |||| |||||
Sbjct: 578 agggagaggagcttcagcagcgcctaggact 608
>BF01021A2B11
Length = 729
Score = 69.9 bits (35), Expect = 1e-11
Identities = 44/47 (93%)
Strand = Plus / Minus
Query: 134 atctaacgcgcgtaaaacgcccacctccaccgtccaagctcctctct 180
||||||| ||||| |||||| ||||||||||||||||||||||||||
Sbjct: 419 atctaacacgcgttaaacgctcacctccaccgtccaagctcctctct 373
>BF01016B1E06
Length = 606
Score = 67.9 bits (34), Expect = 4e-11
Identities = 43/46 (93%)
Strand = Plus / Plus
Query: 142 cgcgtaaaacgcccacctccaccgtccaagctcctctctctaccta 187
||||| |||||| |||||||||||||||| ||||||||||||||||
Sbjct: 265 cgcgttaaacgctcacctccaccgtccaatctcctctctctaccta 310
Database: est
Posted date: Jul 14, 2011 2:25 PM
Number of letters in database: 8,280,457
Number of sequences in database: 9484
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.37 0.711 1.31
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Sequences: 9484
Number of Hits to DB: 215,054
Number of extensions: 14457
Number of successful extensions: 14457
Number of sequences better than 1.0e-10: 11
Number of HSP's gapped: 14454
Number of HSP's successfully gapped: 13
Length of query: 1523
Length of database: 8,280,457
Length adjustment: 17
Effective length of query: 1506
Effective length of database: 8,119,229
Effective search space: 12227558874
Effective search space used: 12227558874
X1: 11 (21.8 bits)
X2: 15 (29.7 bits)
X3: 50 (99.1 bits)
S1: 12 (24.3 bits)
S2: 34 (67.9 bits)