BLASTN 2.2.24 [Aug-08-2010]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= DPGLEAN04999 (UTR included)
(1948 letters)
Database: est
9484 sequences; 8,280,457 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
BF01010B1B06 1491 0.0
>BF01010B1B06
Length = 790
Score = 1491 bits (752), Expect = 0.0
Identities = 776/784 (98%)
Strand = Plus / Plus
Query: 940 ttccacctacagttttagtattgctaatgctttcattccttgttatgaaagttagagata 999
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1 ttccacctacagttttagtattgctaatgctttcattccttgttatgaaagttagagata 60
Query: 1000 atagtcgattatggttgttgagcttcattttgtttaatcattttgctgttatcattacta 1059
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 61 atagtcgattatggttgttgagcttcattttgtttaatcattttgctgttatcattacta 120
Query: 1060 taggttttgttgtgcctcgactgagtttggacacaccatttatattgttttttattcgtg 1119
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 121 taggttttgttgtgcctcgactgagtttggacacaccatttatattgttttttattcgtg 180
Query: 1120 attcaatgattatgacattagtaagtattttggagaccttattgctcatgtccttgacaa 1179
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 181 attcaatgattatgacattagtaagtattttggagaccttattgctcatgtccttgacaa 240
Query: 1180 gaagaatcctaccagctcctatttggataacttctgtgaatcgtcttgttactagaggaa 1239
||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 241 gaagaattctaccagctcctatttggataacttctgtgaatcgtcttgttactagaggaa 300
Query: 1240 taggaaagtatttaatatttagtgagctagaactttgtgaagacctacaagaaaatctga 1299
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 301 taggaaagtatttaatatttagtgagctagaactttgtgaagacctacaagaaaatctga 360
Query: 1300 tttcagaagaaggtactacaaatacagatttgaatccgcgattcaatttggactggatta 1359
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 361 tttcagaagaaggtactacaaatacagatttgaatccgcgattcaatttggactggatta 420
Query: 1360 agtttgccaatttaatcaacagtttcttcgttatattatctatactattttatataatta 1419
|||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||
Sbjct: 421 agtttgccaatttaatcaacagtttctttgttatattatctatactattttatataatta 480
Query: 1420 ttatgtgcaaatatattccgcgttattaatattttaatattgaatgtagtagagcttttt 1479
|||||||||||||||||||||||||||||||||||||||||||| | |||||| ||||||
Sbjct: 481 ttatgtgcaaatatattccgcgttattaatattttaatattgaaggaagtagaacttttt 540
Query: 1480 aatatttttaacccactttcttgttttcgataaatgttctataaatacctaatgtattaa 1539
||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||
Sbjct: 541 tatatttttaacccactttcttgttttcgataaatgttttataaatacctaatgtattaa 600
Query: 1540 tatttcaaaacaaggtaatgaaacgttaaaaaggtcatatattcatagggtaatggatac 1599
|||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||
Sbjct: 601 tatttcaaaacaaggtaatgaaacgttaaaaaggtcatatattcgtagggtaatggatac 660
Query: 1600 attatttctttattcgtacttgaaaggttacgcccacggttttcaactcgctcgcatcct 1659
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 661 attatttctttattcgtacttgaaaggttacgcccacggttttcaactcgctcgcatcct 720
Query: 1660 tcttaaaacggaaaggaacatttaaaccaatttgttgccggataactcacaaatattttt 1719
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 721 tcttaaaacggaaaggaacatttaaaccaatttgttgccggataactcacaaatattttt 780
Query: 1720 tttt 1723
||||
Sbjct: 781 tttt 784
Database: est
Posted date: Jul 14, 2011 2:25 PM
Number of letters in database: 8,280,457
Number of sequences in database: 9484
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.37 0.711 1.31
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Sequences: 9484
Number of Hits to DB: 282,626
Number of extensions: 5927
Number of successful extensions: 5927
Number of sequences better than 1.0e-10: 1
Number of HSP's gapped: 5927
Number of HSP's successfully gapped: 1
Length of query: 1948
Length of database: 8,280,457
Length adjustment: 17
Effective length of query: 1931
Effective length of database: 8,119,229
Effective search space: 15678231199
Effective search space used: 15678231199
X1: 11 (21.8 bits)
X2: 15 (29.7 bits)
X3: 50 (99.1 bits)
S1: 12 (24.3 bits)
S2: 34 (67.9 bits)