BLASTN 2.2.24 [Aug-08-2010]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= DPGLEAN05005 (UTR included)
(5077 letters)
Database: est
9484 sequences; 8,280,457 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
BF01042B2G01 1546 0.0
>BF01042B2G01
Length = 812
Score = 1546 bits (780), Expect = 0.0
Identities = 804/812 (99%)
Strand = Plus / Plus
Query: 3868 gatggaaggttggtgtggttggtcgtaccggtgcaggcaagtcgtcactcatatcagctc 3927
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1 gatggaaggttggtgtggttggtcgtaccggtgcaggcaagtcgtcactcatatcagctc 60
Query: 3928 tcttccggttagcgccgatcgatggaaatgtgtacatagatgacgtagaaacaggcaaaa 3987
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 61 tcttccggttagcgccgatcgatggaaatgtgtacatagatgacgtagaaacaggcaaaa 120
Query: 3988 tagcgctcaaggaactaaggtcgaagatctcaatcattccacaagagccggttctatttt 4047
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 121 tagcgctcaaggaactaaggtcgaagatctcaatcattccacaagagccggttctatttt 180
Query: 4048 cggccagtttacgctacaatttggatccctttgataaatatacggatgccgatatctgga 4107
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 181 cggccagtttacgctacaatttggatccctttgataaatatacggatgccgatatctgga 240
Query: 4108 atgctttagaacaggttgagttgaagaacagcgtgtcctcactgtcggcggaggtggagt 4167
|||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||
Sbjct: 241 atgctttagaacaggtcgagttgaagaacagcgtgtcctcactgtcggcggaggtggagt 300
Query: 4168 ccggcggtgtgaacttcagcgctggacaaaggcagcttttgtgtctggcgcgagctgcac 4227
||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||
Sbjct: 301 ccggcggtgtgaacttcagcgctggacaaaggcagctattgtgtctggcgcgagctgcac 360
Query: 4228 tcgcgagaaacaagctgctcgtgctggatgaggctaccgctaatgttgaccccaacactg 4287
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
Sbjct: 361 tcgcgagaaacaagctgctcgtgctggatgaggctaccgctaatgttgaccccaacaccg 420
Query: 4288 atgctctcatacagaagtctattcggaaacatttttctgaatgtaccgtactaacggtgg 4347
|||| ||||||||||||||||||||||||||||||||||| |||||||||||||||||||
Sbjct: 421 atgccctcatacagaagtctattcggaaacatttttctgagtgtaccgtactaacggtgg 480
Query: 4348 cgcatcgcctccacactgttgctgattccgaccgggttgttgtgatggaggctggagaaa 4407
|||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||
Sbjct: 481 cgcatcgcctccacactgttgctgattccgaccgagttgttgtgatggaggctggagaaa 540
Query: 4408 ttgtggagtgtggtcatcctcacgagttgttgaaaaaggatgacggatacttcactcgta 4467
|||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 541 ttgtggagtgcggtcatcctcacgagttgttgaaaaaggatgacggatacttcactcgta 600
Query: 4468 tggtgaaacaactcgggagtgcctcggagcagagccttcgagaactggcccagaaagcct 4527
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 601 tggtgaaacaactcgggagtgcctcggagcagagccttcgagaactggcccagaaagcct 660
Query: 4528 atttagcacatattaaatatgtcgatgctgatgagcaacctgccttatagatagataatt 4587
||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||
Sbjct: 661 atttagcacatattaaatatgtcgacgctgatgagcaacctgccttatagatagataatt 720
Query: 4588 tacaaaacataacttatttaatggcaacactggctataaagaatctatacaagtacttat 4647
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 721 tacaaaacataacttatttaatggcaacactggctataaagaatctatacaagtacttat 780
Query: 4648 ttcaataccaagtacttaaacatgaaattatt 4679
||||||||||||||||||||||||||||||||
Sbjct: 781 ttcaataccaagtacttaaacatgaaattatt 812
Database: est
Posted date: Jul 14, 2011 2:25 PM
Number of letters in database: 8,280,457
Number of sequences in database: 9484
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.37 0.711 1.31
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Sequences: 9484
Number of Hits to DB: 542,223
Number of extensions: 14363
Number of successful extensions: 14363
Number of sequences better than 1.0e-10: 1
Number of HSP's gapped: 14363
Number of HSP's successfully gapped: 1
Length of query: 5077
Length of database: 8,280,457
Length adjustment: 18
Effective length of query: 5059
Effective length of database: 8,109,745
Effective search space: 41027199955
Effective search space used: 41027199955
X1: 11 (21.8 bits)
X2: 15 (29.7 bits)
X3: 50 (99.1 bits)
S1: 12 (24.3 bits)
S2: 35 (69.9 bits)