BLASTN 2.2.24 [Aug-08-2010]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= DPGLEAN05009 (UTR included)
(4702 letters)
Database: est
9484 sequences; 8,280,457 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
BF01047A2B02 1602 0.0
>BF01047A2B02
Length = 844
Score = 1602 bits (808), Expect = 0.0
Identities = 834/844 (98%)
Strand = Plus / Plus
Query: 2384 ttcagaaaatgtgttattgaaccagaaggcggtcaaaattgaacaaatgaaagaaaattg 2443
|||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1 ttcagaaaatgtattattgaaccagaaggcggtcaaaattgaacaaatgaaagaaaattg 60
Query: 2444 taaagatttggaaaagaaagtatctcatttacgtaaacttataaatatgagcttagatga 2503
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 61 taaagatttggaaaagaaagtatctcatttacgtaaacttataaatatgagcttagatga 120
Query: 2504 atcaaacatgttgaaaaagtttataaacaaacatttccaaatattaaaagataaaatgat 2563
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 121 atcaaacatgttgaaaaagtttataaacaaacatttccaaatattaaaagataaaatgat 180
Query: 2564 gttgttagatgaggctttaaagaatgataccgccagttcaaaaatgtcggatgatttaaa 2623
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 181 gttgttagatgaggctttaaagaatgataccgccagttcaaaaatgtcggatgatttaaa 240
Query: 2624 agaaaccaatcaatccttacttcttcagataaagactatttcagatcaatttaaatccgt 2683
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 241 agaaaccaatcaatccttacttcttcagataaagactatttcagatcaatttaaatccgt 300
Query: 2684 tagcgatgaattaaaacaaagagtgactgaaaatgacaaccttaaagttaaattaaatca 2743
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 301 tagcgatgaattaaaacaaagagtgactgaaaatgacaaccttaaagttaaattaaatca 360
Query: 2744 agctgaatcagatttaaacttacatgtacaaaatatagatattttaaaaaatgaaaacca 2803
|||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||
Sbjct: 361 agctgaatcagatttaaatttacatgtacaaaatatagatattttaaaaaatgaaaacca 420
Query: 2804 aacagttcttaataagttgagtgtattgataaaagaatctgagagttttaacgataactt 2863
|||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||
Sbjct: 421 aacagttcttaataagttgagtgtattgataaaagaatctgagaattttaacgataactt 480
Query: 2864 gatgaaatgtagagaggaaacagcagcgacaatcaaagaacgagatcaagccaaagaaga 2923
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 481 gatgaaatgtagagaggaaacagcagcgacaatcaaagaacgagatcaagccaaagaaga 540
Query: 2924 aaaagaagaagtgaacaaaaaactttctcatcatataaaagaaaatgagtcactaaaaga 2983
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 541 aaaagaagaagtgaacaaaaaactttctcatcatataaaagaaaatgagtcactaaaaga 600
Query: 2984 ccaagttaataaaatcaataatctatataagaatgctgttgaaaaactagatgctttgaa 3043
|||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||
Sbjct: 601 ccaagttaataaaatcaataatctatataagaattctgttgaaaaactagatgctttgaa 660
Query: 3044 taaagaaattgatgatttacgtgatatgaaattaaattacaaagagaaatgtaacagtac 3103
|||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||
Sbjct: 661 taaagaaattgatgatttacgtgatatgaaattaaattacgaagagaaatgtaacagtac 720
Query: 3104 agttacattacagaaacgtattgatgaacttactcaagaaaatgcttcattgaaaaaaat 3163
||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||
Sbjct: 721 agttacattacagaaacgtattgatgaacttactcaagaaaatgcttcattaaaaaaaat 780
Query: 3164 gtctgaaacaattgccagtgctttagaaggaattgagtctgaattgaaagatgtacgtaa 3223
|||| ||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 781 gtctnnnncaattgccagtgctttagaaggaattgagtctgaattgaaagatgtacgtaa 840
Query: 3224 ttct 3227
||||
Sbjct: 841 ttct 844
Database: est
Posted date: Jul 14, 2011 2:25 PM
Number of letters in database: 8,280,457
Number of sequences in database: 9484
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.37 0.711 1.31
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Sequences: 9484
Number of Hits to DB: 707,146
Number of extensions: 15344
Number of successful extensions: 15344
Number of sequences better than 1.0e-10: 1
Number of HSP's gapped: 15344
Number of HSP's successfully gapped: 1
Length of query: 4702
Length of database: 8,280,457
Length adjustment: 18
Effective length of query: 4684
Effective length of database: 8,109,745
Effective search space: 37986045580
Effective search space used: 37986045580
X1: 11 (21.8 bits)
X2: 15 (29.7 bits)
X3: 50 (99.1 bits)
S1: 12 (24.3 bits)
S2: 35 (69.9 bits)