BLASTN 2.2.24 [Aug-08-2010]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= DPGLEAN05027 (UTR included)
(2293 letters)
Database: est
9484 sequences; 8,280,457 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
BF01033B2G07 1497 0.0
>BF01033B2G07
Length = 780
Score = 1497 bits (755), Expect = 0.0
Identities = 767/771 (99%)
Strand = Plus / Plus
Query: 1008 gccgtgaccggttccacggatggcatcggtaaggagtacgctctcgagctggctcggctg 1067
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 10 gccgtgaccggttccacggatggcatcggtaaggagtacgctctcgagctggctcggctg 69
Query: 1068 gggatgaacgtggtgctcatcagtcgcagcgaagacaagctgagaacagtctccagagag 1127
|||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||
Sbjct: 70 gggatgaacgtggtgctcatcagtcgcagcgaagacaagctgagaacagtctccagggag 129
Query: 1128 atcgagaagctgcacggggtgaaaaccaaaatcatcgtagcagatttcagcaaaggaact 1187
||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||
Sbjct: 130 atcgagaagctgcacggggtgaaaaccaaaatcatcgtagcggatttcagcaaaggaact 189
Query: 1188 gagatttatcagaacattgagaatggactcaaggatgtgcccttgggtatcttggtgaat 1247
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 190 gagatttatcagaacattgagaatggactcaaggatgtgcccttgggtatcttggtgaat 249
Query: 1248 aacgtcggagttcaatacgagtatccgatgccgctggtggagttgcctgtgagtaaagcc 1307
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 250 aacgtcggagttcaatacgagtatccgatgccgctggtggagttgcctgtgagtaaagcc 309
Query: 1308 tgggagctgatcagtgtgaacgtggtcgcggtgacaaccctgacccgcatggtgctgccc 1367
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 310 tgggagctgatcagtgtgaacgtggtcgcggtgacaaccctgacccgcatggtgctgccc 369
Query: 1368 gggatgttggcccgggggcggggggccgtcgtcaacgtgtcctcgggctccgagctgcag 1427
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 370 gggatgttggcccgggggcggggggccgtcgtcaacgtgtcctcgggctccgagctgcag 429
Query: 1428 cccctgccgcttatggctgtgtacgctgccactaagtcgtacgtgcgcagcctgacgctg 1487
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 430 cccctgccgcttatggctgtgtacgctgccactaagtcgtacgtgcgcagcctgacgctg 489
Query: 1488 gcgctccgtgcggaggtgtctccgactgtgacggtgcagcacgtgtctccgctgttcgtg 1547
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 490 gcgctccgtgcggaggtgtctccgactgtgacggtgcagcacgtgtctccgctgttcgtg 549
Query: 1548 tccactaagatgaacaccttctcccccacactcctggccggcaacccgctggtgcccgac 1607
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 550 tccactaagatgaacaccttctcccccacactcctggccggcaacccgctggtgcccgac 609
Query: 1608 gcgaggacctacgccaggcacgccgtccgcacgctggggagagtcaccgctacgtccggc 1667
||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||
Sbjct: 610 gcgaggacctacgccaggcacgccgtccgcacgctggggtgagtcaccgctacgtccggc 669
Query: 1668 tattgggtccatggcgttcagagtttcttcatcaaactagccccggaatgggtccggata 1727
|| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 670 tactgggtccatggcgttcagagtttcttcatcaaactagccccggaatgggtccggata 729
Query: 1728 aaggtcggcgctcaaatgaacagagaattcagagaggaacacatgagagcg 1778
|||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 730 aaggtcggcgctcaaatgaacagagaattcagagaggaacacatgagagcg 780
Score = 468 bits (236), Expect = e-131
Identities = 242/244 (99%)
Strand = Plus / Plus
Query: 654 ccttgggctgccgtgaccggttccacggatggcatcggtaaggagtacgctctcgagctg 713
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1 ccttgggctgccgtgaccggttccacggatggcatcggtaaggagtacgctctcgagctg 60
Query: 714 gctcggctggggatgaacgtggtgctcatcagtcgcagcgaagacaagctgagaacagtc 773
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 61 gctcggctggggatgaacgtggtgctcatcagtcgcagcgaagacaagctgagaacagtc 120
Query: 774 tccagagagatcgagaagctgcacggggtgaaaaccaaaatcatcgtagcagatttcagc 833
||||| |||||||||||||||||||||||||||||||||||||||||||| |||||||||
Sbjct: 121 tccagggagatcgagaagctgcacggggtgaaaaccaaaatcatcgtagcggatttcagc 180
Query: 834 aaaggaactgagatttatcagaacattgagaatggactcaaggatgtgcccttgggtatc 893
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 181 aaaggaactgagatttatcagaacattgagaatggactcaaggatgtgcccttgggtatc 240
Query: 894 ttgg 897
||||
Sbjct: 241 ttgg 244
Score = 214 bits (108), Expect = 5e-55
Identities = 111/112 (99%)
Strand = Plus / Plus
Query: 897 gagaagctgcacggggtgaaaaccaaaatcatcgtagcggatttcagcaaaggcactgag 956
||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||
Sbjct: 133 gagaagctgcacggggtgaaaaccaaaatcatcgtagcggatttcagcaaaggaactgag 192
Query: 957 atttatcagaacattgagaatggactcaaggatgtgcccttgggtatcttgg 1008
||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 193 atttatcagaacattgagaatggactcaaggatgtgcccttgggtatcttgg 244
Database: est
Posted date: Jul 14, 2011 2:25 PM
Number of letters in database: 8,280,457
Number of sequences in database: 9484
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.37 0.711 1.31
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Sequences: 9484
Number of Hits to DB: 246,340
Number of extensions: 5286
Number of successful extensions: 5286
Number of sequences better than 1.0e-10: 1
Number of HSP's gapped: 5286
Number of HSP's successfully gapped: 3
Length of query: 2293
Length of database: 8,280,457
Length adjustment: 17
Effective length of query: 2276
Effective length of database: 8,119,229
Effective search space: 18479365204
Effective search space used: 18479365204
X1: 11 (21.8 bits)
X2: 15 (29.7 bits)
X3: 50 (99.1 bits)
S1: 12 (24.3 bits)
S2: 34 (67.9 bits)