BLASTN 2.2.24 [Aug-08-2010]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= DPGLEAN05043 (UTR included)
(2128 letters)
Database: est
9484 sequences; 8,280,457 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
BF01014A2B03 1178 0.0
BF01013B2D01 1174 0.0
>BF01014A2B03
Length = 780
Score = 1178 bits (594), Expect = 0.0
Identities = 618/626 (98%)
Strand = Plus / Plus
Query: 892 tggagacgaggagcagatcgagcgcccacaccggagagcacggggtcgacgaatatccgg 951
|||| ||||| |||| ||||||||||||||||||||||||||| ||||| ||||||||||
Sbjct: 122 tggaaacgagaagcaaatcgagcgcccacaccggagagcacggagtcgatgaatatccgg 181
Query: 952 acatcagtggaataacgaacgcaagagaagccatgcggaaaatgacggaagaagataaga 1011
||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 182 acatcagcggaataacgaacgcaagagaagccatgcggaaaatgacggaagaagataaga 241
Query: 1012 ggaagatactccagcaagtggagttgttcaggcgggagaagatgaccttcgacaacgagg 1071
||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||
Sbjct: 242 ggaagatactccagcaagtggagttgttcagacgggagaagatgaccttcgacaacgagg 301
Query: 1072 tcgctaagtgggacgatgccggaaacgacatcataatgttggccaaacacatgtgtatga 1131
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 302 tcgctaagtgggacgatgccggaaacgacatcataatgttggccaaacacatgtgtatga 361
Query: 1132 tcatgctcgaaatgacagacttcaccagaggccgcggtcccttgaagacgaccatggacg 1191
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 362 tcatgctcgaaatgacagacttcaccagaggccgcggtcccttgaagacgaccatggacg 421
Query: 1192 tcattaacgcggccaagaagatatcggaggctggaactaaactggacaaactcacgagag 1251
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 422 tcattaacgcggccaagaagatatcggaggctggaactaaactggacaaactcacgagag 481
Query: 1252 aaatagccgaacagtgcccggagtcgtcgaccaaacaggatttgctggcctaccttcagc 1311
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 482 aaatagccgaacagtgcccggagtcgtcgaccaaacaggatttgctggcctaccttcagc 541
Query: 1312 gtatagcgctctactgtcaccagatacagatcaccagcaaggtgaaggcggacgttcaga 1371
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 542 gtatagcgctctactgtcaccagatacagatcaccagcaaggtgaaggcggacgttcaga 601
Query: 1372 acatatccggcgagctgatcgttagcgggttggacagcgccacgtctctcatacaagctg 1431
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 602 acatatccggcgagctgatcgttagcgggttggacagcgccacgtctctcatacaagctg 661
Query: 1432 ccaaaaacctgatgaatgctgtggtgctgacggtcaaggcctcgtacgtcgcctctacaa 1491
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
Sbjct: 662 ccaaaaacctgatgaatgctgtggtgctgacggtcaaggcctcgtacgtcgcctctacga 721
Query: 1492 aatacacccgacagggcactatcgcc 1517
||||||||||||||||||||||||||
Sbjct: 722 aatacacccgacagggcactatcgcc 747
Score = 153 bits (77), Expect = 1e-36
Identities = 77/77 (100%)
Strand = Plus / Plus
Query: 734 gaacagggacgaagaggatctggaccccgaggacgtggagctcgacgagcattacaccct 793
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 63 gaacagggacgaagaggatctggaccccgaggacgtggagctcgacgagcattacaccct 122
Query: 794 ggaaacgagaagcaaat 810
|||||||||||||||||
Sbjct: 123 ggaaacgagaagcaaat 139
>BF01013B2D01
Length = 708
Score = 1174 bits (592), Expect = 0.0
Identities = 604/608 (99%)
Strand = Plus / Plus
Query: 910 cgagcgcccacaccggagagcacggggtcgacgaatatccggacatcagtggaataacga 969
||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||
Sbjct: 82 cgagcgcccacaccggagagcacggggtcgacgaatatccggacatcagcggaataacga 141
Query: 970 acgcaagagaagccatgcggaaaatgacggaagaagataagaggaagatactccagcaag 1029
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 142 acgcaagagaagccatgcggaaaatgacggaagaagataagaggaagatactccagcaag 201
Query: 1030 tggagttgttcaggcgggagaagatgaccttcgacaacgaggtcgctaagtgggacgatg 1089
||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 202 tggagttgttcagacgggagaagatgaccttcgacaacgaggtcgctaagtgggacgatg 261
Query: 1090 ccggaaacgacatcataatgttggccaaacacatgtgtatgatcatgctcgaaatgacag 1149
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 262 ccggaaacgacatcataatgttggccaaacacatgtgtatgatcatgctcgaaatgacag 321
Query: 1150 acttcaccagaggccgcggtcccttgaagacgaccatggacgtcattaacgcggccaaga 1209
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 322 acttcaccagaggccgcggtcccttgaagacgaccatggacgtcattaacgcggccaaga 381
Query: 1210 agatatcggaggctggaactaaactggacaaactcacgagagaaatagccgaacagtgcc 1269
|||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||
Sbjct: 382 agatatcggaggctggaactaaactggacaaactcacgagagaaattgccgaacagtgcc 441
Query: 1270 cggagtcgtcgaccaaacaggatttgctggcctaccttcagcgtatagcgctctactgtc 1329
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 442 cggagtcgtcgaccaaacaggatttgctggcctaccttcagcgtatagcgctctactgtc 501
Query: 1330 accagatacagatcaccagcaaggtgaaggcggacgttcagaacatatccggcgagctga 1389
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 502 accagatacagatcaccagcaaggtgaaggcggacgttcagaacatatccggcgagctga 561
Query: 1390 tcgttagcgggttggacagcgccacgtctctcatacaagctgccaaaaacctgatgaatg 1449
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 562 tcgttagcgggttggacagcgccacgtctctcatacaagctgccaaaaacctgatgaatg 621
Query: 1450 ctgtggtgctgacggtcaaggcctcgtacgtcgcctctacaaaatacacccgacagggca 1509
|||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||
Sbjct: 622 ctgtggtgctgacggtcaaggcctcgtacgtcgcctctaccaaatacacccgacagggca 681
Query: 1510 ctatcgcc 1517
||||||||
Sbjct: 682 ctatcgcc 689
Database: est
Posted date: Jul 14, 2011 2:25 PM
Number of letters in database: 8,280,457
Number of sequences in database: 9484
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.37 0.711 1.31
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Sequences: 9484
Number of Hits to DB: 245,778
Number of extensions: 5629
Number of successful extensions: 5629
Number of sequences better than 1.0e-10: 2
Number of HSP's gapped: 5629
Number of HSP's successfully gapped: 3
Length of query: 2128
Length of database: 8,280,457
Length adjustment: 17
Effective length of query: 2111
Effective length of database: 8,119,229
Effective search space: 17139692419
Effective search space used: 17139692419
X1: 11 (21.8 bits)
X2: 15 (29.7 bits)
X3: 50 (99.1 bits)
S1: 12 (24.3 bits)
S2: 34 (67.9 bits)