BLASTN 2.2.24 [Aug-08-2010]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= DPGLEAN05073 (UTR included)
(1057 letters)
Database: est
9484 sequences; 8,280,457 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
BF14_1567_C1 916 0.0
BF14_729_C3 145 2e-34
BF01049B2H03 100 9e-21
BF14_729_C2 92 2e-18
BF01012A1B09 90 8e-18
BF01025A1A12 88 3e-17
BF01042A2B06 86 1e-16
BF14_1695_C1 74 5e-13
BF01011A1H06 72 2e-12
BF01061B1E05 68 3e-11
>BF14_1567_C1
Length = 1193
Score = 916 bits (462), Expect = 0.0
Identities = 494/505 (97%), Gaps = 6/505 (1%)
Strand = Plus / Plus
Query: 316 aggatcgggcggtctccagagaagccgggcaggcttttgcacaaaaacacagaatgcttt 375
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 519 aggatcgggcggtctccagagaagccgggcaggcttttgcacaaaaacacagaatgcttt 578
Query: 376 tcattgagagcagcgcaaagacacaagaaggcatcaatctggcgtttgaagagctcgtac 435
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 579 tcattgagagcagcgcaaagacacaagaaggcatcaatctggcgtttgaagagctcgtac 638
Query: 436 aaaagataatagagactcccggtctgtgggagtctaccggctcgtcttccaacatccgcg 495
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 639 aaaagataatagagactcccggtctgtgggagtctaccggctcgtcttccaacatccgcg 698
Query: 496 tcaccagcgaggagcgttcgcagcaggaatcctcctgctacgattacacctgttccattt 555
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 699 tcaccagcgaggagcgttcgcagcaggaatcctcctgctacgattacacctgttccattt 758
Query: 556 aatgaattctatatgagttggctgttatctgtacatctatatttgacctcaaagaaatca 615
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 759 aatgaattctatatgagttggctgttatctgtacatctatatttgacctcaaagaaatca 818
Query: 616 tttaattatctccttataaaaaacagatagttatttgttttattgtaaatatattaatgt 675
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 819 tttaattatctccttataaaaaacagatagttatttgttttattgtaaatatattaatgt 878
Query: 676 atatctttatgcacctccaaaattttatctaggtatcattacgatgcaagggagacgcta 735
||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||
Sbjct: 879 atatctttatgcacctccaaaatattatctaggtatcattacgatgcaagggagacgct- 937
Query: 736 ggaggagtttatagaaaccctaacactagttccatcggaaaattttgcaggatcttaaac 795
|||||||||||||| ||||||||||||||||||||||||||||||| || |||||
Sbjct: 938 -----agtttatagaaaccttaacactagttccatcggaaaattttgcaggttcataaac 992
Query: 796 cttctagaactttatcatgcgcgaa 820
||||| |||||||||||||||||||
Sbjct: 993 cttcttgaactttatcatgcgcgaa 1017
>BF14_729_C3
Length = 2041
Score = 145 bits (73), Expect = 2e-34
Identities = 140/160 (87%), Gaps = 3/160 (1%)
Strand = Plus / Minus
Query: 52 atgagatctgagactttcgcgagtattcatttaaatgaaactaatattattcggat-cac 110
||||||||| ||| ||||||||||||||||||||||||| ||| |||||||||||| ||
Sbjct: 1729 atgagatctaagattttcgcgagtattcatttaaatgaagctagtattattcggatatac 1670
Query: 111 tgcgcgtattttattatttttaaaagcttcatactctcgacgtttccgttactatgcagc 170
| |||| ||||||||| ||||||| || |||| || ||||||||| |||||| ||||||
Sbjct: 1669 tacgcggattttatta--tttaaaaactacataatcccgacgtttcggttactttgcagc 1612
Query: 171 aaccgtgatcatatccagacgaggtgtgaatgtctgtcag 210
||||||||||| |||||||||||||||||||||||||
Sbjct: 1611 aaccgtgatcacgggcagacgaggtgtgaatgtctgtcag 1572
>BF01049B2H03
Length = 832
Score = 99.6 bits (50), Expect = 9e-21
Identities = 71/78 (91%)
Strand = Plus / Minus
Query: 49 ataatgagatctgagactttcgcgagtattcatttaaatgaaactaatattattcggatc 108
|||||||||||| ||| ||| |||||||||||||||||||||||||||||| |||||||
Sbjct: 355 ataatgagatctaagattttagcgagtattcatttaaatgaaactaatatttttcggatt 296
Query: 109 actgcgcgtattttatta 126
||| |||||||||||||
Sbjct: 295 actaagcgtattttatta 278
>BF14_729_C2
Length = 1289
Score = 91.7 bits (46), Expect = 2e-18
Identities = 115/136 (84%), Gaps = 4/136 (2%)
Strand = Plus / Minus
Query: 50 taatgagatctgagactttcgcgagtatt---catttaaatgaaactaatattattcgga 106
||||||||||| |||||||||| ||| || |||||||||||||||| ||||||||||
Sbjct: 676 taatgagatctaagactttcgccagttttaatcatttaaatgaaactagaattattcgga 617
Query: 107 tca-ctgcgcgtattttattatttttaaaagcttcatactctcgacgtttccgttactat 165
| | || ||||| |||||| || |||||| || ||||||| ||||||||| |||||| |
Sbjct: 616 taaactacgcgtgctttatttttgttaaaaactacatactcccgacgtttcggttacttt 557
Query: 166 gcagcaaccgtgatca 181
|||||||||||||||
Sbjct: 556 tcagcaaccgtgatca 541
>BF01012A1B09
Length = 841
Score = 89.7 bits (45), Expect = 8e-18
Identities = 114/134 (85%), Gaps = 6/134 (4%)
Strand = Plus / Plus
Query: 52 atgagatctgagactttcgcgagt---attcatttaaatgaaactaatattattcggat- 107
||||||||| ||||| |||||||| ||||||||||||||||||||||| |||||||
Sbjct: 705 atgagatctaagactgtcgcgagttttattcatttaaatgaaactaatatatttcggata 764
Query: 108 cactgcgcgtattttattatttttaaaagcttcatactctcgacgtttccgttactatgc 167
|||| |||| ||||||||||||| ||| || |||| || ||||||||| |||||| | |
Sbjct: 765 cactacgcggattttattatttt--aaaactacataatcccgacgtttcggttacttttc 822
Query: 168 agcaaccgtgatca 181
|||| |||||||||
Sbjct: 823 agcagccgtgatca 836
>BF01025A1A12
Length = 880
Score = 87.7 bits (44), Expect = 3e-17
Identities = 72/80 (90%), Gaps = 1/80 (1%)
Strand = Plus / Plus
Query: 81 tttaaatgaaactaatattattcggatcactgcgcgtattttattatttttaaaagcttc 140
||||||||||||||||||| ||||||| || ||||||||||||||| ||||||| || |
Sbjct: 84 tttaaatgaaactaatatt-ttcggatagcttcgcgtattttattatgtttaaaaactac 142
Query: 141 atactctcgacgtttccgtt 160
|||||| |||||||||||||
Sbjct: 143 atactcccgacgtttccgtt 162
>BF01042A2B06
Length = 781
Score = 85.7 bits (43), Expect = 1e-16
Identities = 116/137 (84%), Gaps = 5/137 (3%)
Strand = Plus / Minus
Query: 49 ataatgagatctgagactttcgcgagtattcatttaaatgaaactaatattattcggatc 108
||||||||||| |||||||||||||||||| ||||||| ||| ||||||| |||||||
Sbjct: 374 ataatgagatcaaagactttcgcgagtattcgtttaaattaaagtaatatt-ttcggatt 316
Query: 109 actgcgcg-tattttattat---ttttaaaagcttcatactctcgacgtttccgttacta 164
||| |||| ||||| ||||| |||| ||| || ||||||| ||||||||| ||||||
Sbjct: 315 actacgcgttatttaattatttatttttaaaactacatactcacgacgtttcggttactt 256
Query: 165 tgcagcaaccgtgatca 181
||||||||||| ||||
Sbjct: 255 cgcagcaaccgtaatca 239
>BF14_1695_C1
Length = 1407
Score = 73.8 bits (37), Expect = 5e-13
Identities = 43/45 (95%)
Strand = Plus / Plus
Query: 50 taatgagatctgagactttcgcgagtattcatttaaatgaaacta 94
||||||||||| ||| |||||||||||||||||||||||||||||
Sbjct: 1020 taatgagatctaagattttcgcgagtattcatttaaatgaaacta 1064
>BF01011A1H06
Length = 739
Score = 71.9 bits (36), Expect = 2e-12
Identities = 137/166 (82%), Gaps = 6/166 (3%)
Strand = Plus / Minus
Query: 50 taatgagatctgagactttcgcgagt---attcatttaaatgaaactaatattattcgga 106
||||||||||| ||| |||||||| | ||||||||||||||| ||| |||| ||||||
Sbjct: 608 taatgagatctaagattttcgcgacttttattcatttaaatgaatctagtatttttcgga 549
Query: 107 tca-ctgcgcgtattttattatttttaaaag-cttcatactctcgacgtttccgttacta 164
| | || ||||| |||||| ||| |||||| || ||||||| ||||||||| ||||||
Sbjct: 548 taaactacgcgtgatttatt-tttgtaaaagactacatactcccgacgtttcggttactt 490
Query: 165 tgcagcaaccgtgatcatatccagacgaggtgtgaatgtctgtcag 210
| ||| ||||||||||| |||||||| ||||| ||||||||||
Sbjct: 489 ttcagtaaccgtgatcacgggcagacgagatgtgagtgtctgtcag 444
>BF01061B1E05
Length = 745
Score = 67.9 bits (34), Expect = 3e-11
Identities = 40/42 (95%)
Strand = Plus / Minus
Query: 53 tgagatctgagactttcgcgagtattcatttaaatgaaacta 94
|||||||| ||| |||||||||||||||||||||||||||||
Sbjct: 54 tgagatctaagattttcgcgagtattcatttaaatgaaacta 13
Database: est
Posted date: Jul 14, 2011 2:25 PM
Number of letters in database: 8,280,457
Number of sequences in database: 9484
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.37 0.711 1.31
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Sequences: 9484
Number of Hits to DB: 130,024
Number of extensions: 2852
Number of successful extensions: 2852
Number of sequences better than 1.0e-10: 10
Number of HSP's gapped: 2841
Number of HSP's successfully gapped: 11
Length of query: 1057
Length of database: 8,280,457
Length adjustment: 17
Effective length of query: 1040
Effective length of database: 8,119,229
Effective search space: 8443998160
Effective search space used: 8443998160
X1: 11 (21.8 bits)
X2: 15 (29.7 bits)
X3: 50 (99.1 bits)
S1: 12 (24.3 bits)
S2: 34 (67.9 bits)