BLASTN 2.2.24 [Aug-08-2010]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= DPGLEAN05076 (UTR included)
(1207 letters)
Database: est
9484 sequences; 8,280,457 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
BF01042A2B06 94 6e-19
BF01022A1G02 94 6e-19
BF14_1695_C1 94 6e-19
BF01061B1E05 88 4e-17
BF01058A1C03 86 2e-16
BF01049B2H03 86 2e-16
BF14_2249_C1 82 2e-15
BF14_729_C3 82 2e-15
BF01012B1G11 72 2e-12
BF14_3184_C1 70 9e-12
>BF01042A2B06
Length = 781
Score = 93.7 bits (47), Expect = 6e-19
Identities = 62/67 (92%)
Strand = Plus / Minus
Query: 1138 taatgagattcaagactttcgcgagtattcatttaaatgaaactaatattttcggattac 1197
||||||||| ||||||||||||||||||| ||||||| ||| |||||||||||||||||
Sbjct: 373 taatgagatcaaagactttcgcgagtattcgtttaaattaaagtaatattttcggattac 314
Query: 1198 tacgcgt 1204
|||||||
Sbjct: 313 tacgcgt 307
>BF01022A1G02
Length = 638
Score = 93.7 bits (47), Expect = 6e-19
Identities = 62/67 (92%)
Strand = Plus / Plus
Query: 1138 taatgagattcaagactttcgcgagtattcatttaaatgaaactaatattttcggattac 1197
|||||||||| ||||||| || |||| |||||||||||||| ||||||||||||||||||
Sbjct: 499 taatgagatttaagacttgcgggagtgttcatttaaatgaagctaatattttcggattac 558
Query: 1198 tacgcgt 1204
|||||||
Sbjct: 559 tacgcgt 565
>BF14_1695_C1
Length = 1407
Score = 93.7 bits (47), Expect = 6e-19
Identities = 47/47 (100%)
Strand = Plus / Plus
Query: 199 taatgagatctaagattttcgcgagtattcatttaaatgaaactagt 245
|||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1020 taatgagatctaagattttcgcgagtattcatttaaatgaaactagt 1066
>BF01061B1E05
Length = 745
Score = 87.7 bits (44), Expect = 4e-17
Identities = 44/44 (100%)
Strand = Plus / Minus
Query: 202 tgagatctaagattttcgcgagtattcatttaaatgaaactagt 245
||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 54 tgagatctaagattttcgcgagtattcatttaaatgaaactagt 11
>BF01058A1C03
Length = 779
Score = 85.7 bits (43), Expect = 2e-16
Identities = 43/43 (100%)
Strand = Plus / Minus
Query: 1155 ttcgcgagtattcatttaaatgaaactaatattttcggattac 1197
|||||||||||||||||||||||||||||||||||||||||||
Sbjct: 523 ttcgcgagtattcatttaaatgaaactaatattttcggattac 481
>BF01049B2H03
Length = 832
Score = 85.7 bits (43), Expect = 2e-16
Identities = 65/71 (91%), Gaps = 1/71 (1%)
Strand = Plus / Minus
Query: 1138 taatgagattcaagactttcgcgagtattcatttaaatgaaactaata-ttttcggatta 1196
||||||||| |||| ||| |||||||||||||||||||||||||||| |||||||||||
Sbjct: 354 taatgagatctaagattttagcgagtattcatttaaatgaaactaatatttttcggatta 295
Query: 1197 ctacgcgtatt 1207
||| |||||||
Sbjct: 294 ctaagcgtatt 284
Score = 81.8 bits (41), Expect = 2e-15
Identities = 44/45 (97%)
Strand = Plus / Minus
Query: 199 taatgagatctaagattttcgcgagtattcatttaaatgaaacta 243
||||||||||||||||||| |||||||||||||||||||||||||
Sbjct: 354 taatgagatctaagattttagcgagtattcatttaaatgaaacta 310
>BF14_2249_C1
Length = 1315
Score = 81.8 bits (41), Expect = 2e-15
Identities = 44/45 (97%)
Strand = Plus / Plus
Query: 1161 agtattcatttaaatgaaactaatattttcggattactacgcgta 1205
||||||||||||||||||||||||||||||||||| |||||||||
Sbjct: 339 agtattcatttaaatgaaactaatattttcggattgctacgcgta 383
>BF14_729_C3
Length = 2041
Score = 81.8 bits (41), Expect = 2e-15
Identities = 44/45 (97%)
Strand = Plus / Minus
Query: 201 atgagatctaagattttcgcgagtattcatttaaatgaaactagt 245
||||||||||||||||||||||||||||||||||||||| |||||
Sbjct: 1729 atgagatctaagattttcgcgagtattcatttaaatgaagctagt 1685
>BF01012B1G11
Length = 697
Score = 71.9 bits (36), Expect = 2e-12
Identities = 45/48 (93%)
Strand = Plus / Minus
Query: 1153 ctttcgcgagtattcatttaaatgaaactaatattttcggattactac 1200
|||||||||||||||||||||||| |||||||||||||| |||||||
Sbjct: 631 ctttcgcgagtattcatttaaatgtaactaatattttcgacttactac 584
>BF14_3184_C1
Length = 1256
Score = 69.9 bits (35), Expect = 9e-12
Identities = 38/39 (97%)
Strand = Plus / Plus
Query: 205 gatctaagattttcgcgagtattcatttaaatgaaacta 243
||||||||||||||||||||| |||||||||||||||||
Sbjct: 14 gatctaagattttcgcgagtactcatttaaatgaaacta 52
Database: est
Posted date: Jul 14, 2011 2:25 PM
Number of letters in database: 8,280,457
Number of sequences in database: 9484
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.37 0.711 1.31
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Sequences: 9484
Number of Hits to DB: 137,405
Number of extensions: 2813
Number of successful extensions: 2813
Number of sequences better than 1.0e-10: 10
Number of HSP's gapped: 2812
Number of HSP's successfully gapped: 11
Length of query: 1207
Length of database: 8,280,457
Length adjustment: 17
Effective length of query: 1190
Effective length of database: 8,119,229
Effective search space: 9661882510
Effective search space used: 9661882510
X1: 11 (21.8 bits)
X2: 15 (29.7 bits)
X3: 50 (99.1 bits)
S1: 12 (24.3 bits)
S2: 34 (67.9 bits)