BLASTN 2.2.24 [Aug-08-2010]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= DPGLEAN05091 (UTR included)
(1410 letters)
Database: est
9484 sequences; 8,280,457 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
BF14_2065_C1 1324 0.0
>BF14_2065_C1
Length = 780
Score = 1324 bits (668), Expect = 0.0
Identities = 693/702 (98%)
Strand = Plus / Plus
Query: 69 ttgtgggttataaacgctacctccttagtacttagtaaatagtaggtacgtttttacaac 128
|||| |||||||||||||||||||||||||||| |||||||||||||||||||||||||
Sbjct: 1 ttgtaggttataaacgctacctccttagtacttnntaaatagtaggtacgtttttacaac 60
Query: 129 atattatatcaaactatttatagtttaaaaagtgaagggataatatcataataaatatga 188
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 61 atattatatcaaactatttatagtttaaaaagtgaagggataatatcataataaatatga 120
Query: 189 gtagtagtgacgaagattcaaatcattcagaggaagagcaaggtcaagaagacgatgaac 248
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 121 gtagtagtgacgaagattcaaatcattcagaggaagagcaaggtcaagaagacgatgaac 180
Query: 249 gtctgtctataaaaaacgagatatcttcattgtcctttgaagctcttcaaaaattaaaag 308
||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 181 gtctgactataaaaaacgagatatcttcattgtcctttgaagctcttcaaaaattaaaag 240
Query: 309 agagaataggtgcaaaagtttacaaggaagtaatttttggagaaaataaaaattctaaaa 368
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 241 agagaataggtgcaaaagtttacaaggaagtaatttttggagaaaataaaaattctaaaa 300
Query: 369 aggaacttaagattttcaaacgtgaaaataaaaataggccaagagagatgagctcaaaga 428
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 301 aggaacttaagattttcaaacgtgaaaataaaaataggccaagagagatgagctcaaaga 360
Query: 429 aacctgttccaatgttacaaaatgttgttcctgtaaaaaaaaaagaagttcgagatccaa 488
|||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||
Sbjct: 361 aacctgttccaatgttacaaaatgttgtccctgtaaaaaaaaaagaagttcgagatccaa 420
Query: 489 ggttcgatccgttgtgcggtaattttgataaaaaagagttttctagtaattatggatttc 548
|||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 421 ggtttgatccgttgtgcggtaattttgataaaaaagagttttctagtaattatggatttc 480
Query: 549 tatctgatattcgagtaaatgacataaaagctataagggctgaattaaaacagacaactg 608
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 481 tatctgatattcgagtaaatgacataaaagctataagggctgaattaaaacagacaactg 540
Query: 609 atcccgacaaagagaaagaactgagacgattacttcaaagactaaatgaccaagaaaaag 668
||||||||||||||||||||||||||||| ||||||||||||||||||||||||| || |
Sbjct: 541 atcccgacaaagagaaagaactgagacgactacttcaaagactaaatgaccaagagaagg 600
Query: 669 ctaaaaagaggaataaaatacaaatgaacaacttagaagtggaaaaacaacatgtagaaa 728
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 601 ctaaaaagaggaataaaatacaaatgaacaacttagaagtggaaaaacaacatgtagaaa 660
Query: 729 acaagttcagagagggaatacagccacatttcaaaaataagt 770
||||||||||||||||||||||||||||||||||||||||||
Sbjct: 661 acaagttcagagagggaatacagccacatttcaaaaataagt 702
Database: est
Posted date: Jul 14, 2011 2:25 PM
Number of letters in database: 8,280,457
Number of sequences in database: 9484
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.37 0.711 1.31
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Sequences: 9484
Number of Hits to DB: 226,660
Number of extensions: 4560
Number of successful extensions: 4560
Number of sequences better than 1.0e-10: 1
Number of HSP's gapped: 4558
Number of HSP's successfully gapped: 1
Length of query: 1410
Length of database: 8,280,457
Length adjustment: 17
Effective length of query: 1393
Effective length of database: 8,119,229
Effective search space: 11310085997
Effective search space used: 11310085997
X1: 11 (21.8 bits)
X2: 15 (29.7 bits)
X3: 50 (99.1 bits)
S1: 12 (24.3 bits)
S2: 34 (67.9 bits)