BLASTN 2.2.24 [Aug-08-2010]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= DPGLEAN05120 (UTR included)
(2365 letters)
Database: est
9484 sequences; 8,280,457 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
BF01035X1E04 817 0.0
>BF01035X1E04
Length = 572
Score = 817 bits (412), Expect = 0.0
Identities = 469/488 (96%)
Strand = Plus / Minus
Query: 1878 cgatgaagaaatgctgttcaagccaacaaatactaattatgtttaggtctatatagtcgt 1937
|||||||||||||||||||||||||||||||||| |||||||||||||||||||| ||||
Sbjct: 571 cgatgaagaaatgctgttcaagccaacaaatacttattatgtttaggtctatatactcgt 512
Query: 1938 atatcctagcattgatgtaaactagaatatcagatggagggtacaggtttttttagctac 1997
|||||||||||||| |||||||||||||||||||||||||||||||||||| | ||| ||
Sbjct: 511 atatcctagcattggtgtaaactagaatatcagatggagggtacaggttttgtcagcgac 452
Query: 1998 gaatgtaattaggattaatatgtgtattgttagaagacgatgagttgagtgacgtgatcg 2057
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 451 gaatgtaattaggattaatatgtgtattgttagaagacgatgagttgagtgacgtgatcg 392
Query: 2058 acgcaagcggatgatattagcaaccgaatgtccgatcgagccaaagttgtttttgttcca 2117
||||||||||||||| |||||||||||||||||||||| ||||||||||||||||||| |
Sbjct: 391 acgcaagcggatgattttagcaaccgaatgtccgatcgcgccaaagttgtttttgttcga 332
Query: 2118 tggtccagttatctgaggtagtttttatcaaaaaaaattaggtcgcacaaccaatttaaa 2177
|||||||||||| ||||||||||||||||||||||||||||||||| |||||||||||||
Sbjct: 331 tggtccagttatttgaggtagtttttatcaaaaaaaattaggtcgcccaaccaatttaaa 272
Query: 2178 atttagggccggaaaatagtacccatgtcaaaaaatggttgggaactgaaacgctgagat 2237
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 271 atttagggccggaaaatagtacccatgtcaaaaaatggttgggaactgaaacgctgagat 212
Query: 2238 cgcttcactcaacttgcaccgagagtcttttttcaagaaaagcgagaaaaaatgcgaagg 2297
|||||||||||||||||||||||||| ||||||||||||||||| ||||||||| |||||
Sbjct: 211 cgcttcactcaacttgcaccgagagttttttttcaagaaaagcgggaaaaaatgggaagg 152
Query: 2298 tgcatctcctagccacagtaactgatgaatagtcatttggaatattttaatgcgttgaga 2357
||||| |||||||| || |||||| |||||||||||||||||||||||||||||||||||
Sbjct: 151 tgcatttcctagccccaataactgctgaatagtcatttggaatattttaatgcgttgaga 92
Query: 2358 ccagtagt 2365
|| |||||
Sbjct: 91 cccgtagt 84
Database: est
Posted date: Jul 14, 2011 2:25 PM
Number of letters in database: 8,280,457
Number of sequences in database: 9484
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.37 0.711 1.31
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Sequences: 9484
Number of Hits to DB: 268,369
Number of extensions: 5157
Number of successful extensions: 5157
Number of sequences better than 1.0e-10: 1
Number of HSP's gapped: 5157
Number of HSP's successfully gapped: 1
Length of query: 2365
Length of database: 8,280,457
Length adjustment: 17
Effective length of query: 2348
Effective length of database: 8,119,229
Effective search space: 19063949692
Effective search space used: 19063949692
X1: 11 (21.8 bits)
X2: 15 (29.7 bits)
X3: 50 (99.1 bits)
S1: 12 (24.3 bits)
S2: 34 (67.9 bits)