BLASTN 2.2.24 [Aug-08-2010]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= DPGLEAN05131 (UTR included)
(2113 letters)
Database: est
9484 sequences; 8,280,457 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
BF14_2606_C1 1542 0.0
>BF14_2606_C1
Length = 1029
Score = 1542 bits (778), Expect = 0.0
Identities = 801/810 (98%)
Strand = Plus / Plus
Query: 595 gtaaaatggataagaacgcaccaaacatagcagtgctcggtgctggtgtggttgggacta 654
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 220 gtaaaatggataagaacgcaccaaacatagcagtgctcggtgctggtgtggttgggacta 279
Query: 655 cggtttcgaggatcctgcaagaagaattaagaagtgctgacgtaactgtcatagcggata 714
||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||
Sbjct: 280 cggtttcgaggatcctgcaagaagaattaagaagtgctgacataactgtcatagcggata 339
Query: 715 cgttcaaggaggacacggttagcacagtcgctgccggtatttttagaccgggcaccagtt 774
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 340 cgttcaaggaggacacggttagcacagtcgctgccggtatttttagaccgggcaccagtt 399
Query: 775 tccgtggaccccaagcagaggtcactaagaaatggataaaagactcctggaactattggc 834
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 400 tccgtggaccccaagcagaggtcactaagaaatggataaaagactcctggaactattggc 459
Query: 835 aggagatactcaaaactcctgaagcacctgcagctggtctcatgactctatcatcctaca 894
|||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 460 aggaaatactcaaaactcctgaagcacctgcagctggtctcatgactctatcatcctaca 519
Query: 895 tattctccaaggaaaattatcatacaaccagaaatcatctcatcgaggatctggtgcccg 954
|||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||
Sbjct: 520 tattctccaaggaaaattatcatacaaccagaaatcatctcatcgaggatctcgtgcccg 579
Query: 955 tgtatagagcggtagacgatgacgaattgaaaatctgcggagatggttggaagtacggtt 1014
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 580 tgtatagagcggtagacgatgacgaattgaaaatctgcggagatggttggaagtacggtt 639
Query: 1015 cctattattctacgttaaaaataaaatgtagtagatatttgccctgggcggagcagatgt 1074
||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||
Sbjct: 640 cctattattctacgttaaaaatagaatgtagtagatatttgccctgggcggagcagatgt 699
Query: 1075 tcatagagaagggaggaaaaatcattactcagaaaatcgaggctttctcttctctatcta 1134
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 700 tcatagagaagggaggaaaaatcattactcagaaaatcgaggctttctcttctctatcta 759
Query: 1135 aatatgatttggtctttaactgcaccggcttgggggcgaagactttgtgtcaggataacg 1194
|||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||
Sbjct: 760 aatatgatttggtctttaactgcaccggcttgggggcgaaaactttgtgtcaggataacg 819
Query: 1195 acctggtgtctatacgaggacaagtgataaaagtgagagcgccctggctgaagatggcct 1254
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 820 acctggtgtctatacgaggacaagtgataaaagtgagagcgccctggctgaagatggcct 879
Query: 1255 tctacggagattacgacacctacgtgatccctggactggacggggtcgcgaccttaggag 1314
||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 880 tctacggagattacgacacctacgtgatccctggactggacggggtcgcgaccttannnn 939
Query: 1315 gcgtgcggcagtatgacagctacaacagacaagtgtgtaagcacgacgctgctgcgataa 1374
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 940 gcgtgcggcagtatgacagctacaacagacaagtgtgtaagcacgacgctgctgcgataa 999
Query: 1375 tggaacggtgctgcgacctcctgcccgctc 1404
||||||||||||||||||||||||||||||
Sbjct: 1000 tggaacggtgctgcgacctcctgcccgctc 1029
Database: est
Posted date: Jul 14, 2011 2:25 PM
Number of letters in database: 8,280,457
Number of sequences in database: 9484
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.37 0.711 1.31
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Sequences: 9484
Number of Hits to DB: 244,840
Number of extensions: 5024
Number of successful extensions: 5024
Number of sequences better than 1.0e-10: 1
Number of HSP's gapped: 5023
Number of HSP's successfully gapped: 1
Length of query: 2113
Length of database: 8,280,457
Length adjustment: 17
Effective length of query: 2096
Effective length of database: 8,119,229
Effective search space: 17017903984
Effective search space used: 17017903984
X1: 11 (21.8 bits)
X2: 15 (29.7 bits)
X3: 50 (99.1 bits)
S1: 12 (24.3 bits)
S2: 34 (67.9 bits)