BLASTN 2.2.24 [Aug-08-2010]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= DPGLEAN05140 (UTR included)
(1369 letters)
Database: est
9484 sequences; 8,280,457 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
BF01005B1D03 1098 0.0
>BF01005B1D03
Length = 663
Score = 1098 bits (554), Expect = 0.0
Identities = 633/657 (96%), Gaps = 3/657 (0%)
Strand = Plus / Plus
Query: 372 aaaattatgtctggttattttgtttcgtttaattgattcatattttaaatgtatatgttt 431
|||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||
Sbjct: 1 aaaattatgtctggttattttgtttcgtttaattgattcatattttaaatgtatgtgttt 60
Query: 432 ttcctcacttcaagtttcatcaagacataaagtaagaacaaaattattgttttccgagtg 491
||||||||||||||||||||||||||||||||| |||||||||||||||||||| |
Sbjct: 61 ttcctcacttcaagtttcatcaagacataaagttagaacaaaattattgttttcta--ta 118
Query: 492 ttgttc-accatgagtgatgaaaaacaatcagatgatacatcccaagcagaaatcgtaaa 550
||| |||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 119 ttgccataccatgagtgatgaaaaacaatcagatgatacatcccaagcagaaatcgtaaa 178
Query: 551 cagtgaaaaagatgaacagaaagataacagtgacagaggaaaaacagacaaagttaaaat 610
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 179 cagtgaaaaagatgaacagaaagataacagtgacagaggaaaaacagacaaagttaaaat 238
Query: 611 tgatattttgctaaaggcgacaggtgacgctcctataatgaaaaaaaagaaatgggctgt 670
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 239 tgatattttgctaaaggcgacaggtgacgctcctataatgaaaaaaaagaaatgggctgt 298
Query: 671 ggatgctgagaaacctatcggatggatcatggaatttgttaaaaagtacctaaaactaga 730
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 299 ggatgctgagaaacctatcggatggatcatggaatttgttaaaaagtacctaaaactaga 358
Query: 731 acctgaagaaagattgtttctatatgtcaatcaaacatttgcaccgtcccccgaccagct 790
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 359 acctgaagaaagattgtttctatatgtcaatcaaacatttgcaccgtcccccgaccagct 418
Query: 791 gatcaagaatttgtatgaatgttttgggacggacggtaaactggtgctgcattattgtaa 850
|||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||
Sbjct: 419 gatcaagaatttgtatgaatgttttgggacggacggtaaactagtgctgcattattgtaa 478
Query: 851 gagtcaagcttggggatgaatcgtatgagttataatatattttggtttaatttcaattga 910
|||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||
Sbjct: 479 gagtcaagcttggggatgaatcgtatgagttataatatgttttggtttaatttcaattga 538
Query: 911 tcacaacacaagttctttctgtaaaacgtacatcatcgtacttcattatctcatgttttg 970
|||||||| ||||||||||||||||| ||||||||||||||||||||| |||| || |
Sbjct: 539 tcacaacatgagttctttctgtaaaacatacatcatcgtacttcattatgtcatagttcg 598
Query: 971 gttttatgatgtttcattataatttgatggtcctaatatagcctgaagagattttaa 1027
||||||||||||||||||||||||||||||||| |||| ||| | ||||||||||||
Sbjct: 599 gttttatgatgtttcattataatttgatggtcccaatacagctttaagagattttaa 655
Database: est
Posted date: Jul 14, 2011 2:25 PM
Number of letters in database: 8,280,457
Number of sequences in database: 9484
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.37 0.711 1.31
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Sequences: 9484
Number of Hits to DB: 291,017
Number of extensions: 8565
Number of successful extensions: 8565
Number of sequences better than 1.0e-10: 1
Number of HSP's gapped: 8564
Number of HSP's successfully gapped: 2
Length of query: 1369
Length of database: 8,280,457
Length adjustment: 17
Effective length of query: 1352
Effective length of database: 8,119,229
Effective search space: 10977197608
Effective search space used: 10977197608
X1: 11 (21.8 bits)
X2: 15 (29.7 bits)
X3: 50 (99.1 bits)
S1: 12 (24.3 bits)
S2: 34 (67.9 bits)