BLASTN 2.2.24 [Aug-08-2010]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= DPGLEAN05157 (UTR included)
(1369 letters)
Database: est
9484 sequences; 8,280,457 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
BF14_759_C1 1774 0.0
>BF14_759_C1
Length = 1171
Score = 1774 bits (895), Expect = 0.0
Identities = 924/931 (99%), Gaps = 2/931 (0%)
Strand = Plus / Plus
Query: 441 aattggtgataataaacttattaaaagtttttgtgcttcaaaattcttattcaaagaaaa 500
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 2 aattggtgataataaacttattaaaagtttttgtgcttcaaaattcttattcaaagaaaa 61
Query: 501 atggagaaacctactgttactgaacaaccacccccttactcagcagctactatgggaacg 560
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 62 atggagaaacctactgttactgaacaaccacccccttactcagcagctactatgggaacg 121
Query: 561 ggagcacatacttaccctccgccgccgccgccgccaccccaagggtcattccctccaccg 620
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 122 ggagcacatacttaccctccgccgccgccgccgccaccccaagggtcattccctccaccg 181
Query: 621 ccgggctacacaccatatggtacaaccccgcaaacagcttttgtcccaaactatggggct 680
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 182 ccgggctacacaccatatggtacaaccccgcaaacagcttttgtcccaaactatggggct 241
Query: 681 actaacattatcataccacctcccataatagctgtaggtgcttgcccagcatgtcgagtg 740
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 242 actaacattatcataccacctcccataatagctgtaggtgcttgcccagcatgtcgagtg 301
Query: 741 ggtatattagaagacgatttcacttgtctcggtattttgtgcgccattttatttttccct 800
||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 302 ggtatcttagaagacgatttcacttgtctcggtattttgtgcgccattttatttttccct 361
Query: 801 atcggcattttgtgctgtttggcgatgaagaatagacggtgctccaattgcggcgctatg 860
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 362 atcggcattttgtgctgtttggcgatgaagaatagacggtgctccaattgcggcgctatg 421
Query: 861 tttggataagacatgtcttttttggctcggttcatttataagttgttaccgtccagaatt 920
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 422 tttggataagacatgtcttttttggctcggttcatttataagttgttaccgtccagaatt 481
Query: 921 ctgattggtaatttaagtgataattctataaaatctctttggtttactaatatggagcct 980
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 482 ctgattggtaatttaagtgataattctataaaatctctttggtttactaatatggagcct 541
Query: 981 ctttctctttgactgtgtcttggaagttgatatcgaatttatacatgaatatgatcttaa 1040
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 542 ctttctctttgactgtgtcttggaagttgatatcgaatttatacatgaatatgatcttaa 601
Query: 1041 atgaaaatattttcgaactacaaaataaaacagacttgaaaccatagtttgctctgattg 1100
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 602 atgaaaatattttcgaactacaaaataaaacagacttgaaaccatagtttgctctgattg 661
Query: 1101 tttaggaaagttcaaaaaatttattgaacttaataatattcattactcctttatttttaa 1160
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 662 tttaggaaagttcaaaaaatttattgaacttaataatattcattactcctttatttttaa 721
Query: 1161 tatttttgtttttataataatggatgttaaatatatactattaccctttatttttg-aaa 1219
|||||||||||||||||||||||||||||||||||||| ||| ||||||||||||| |||
Sbjct: 722 tatttttgtttttataataatggatgttaaatatataccattcccctttatttttgaaaa 781
Query: 1220 aaaaaagtcttataatgttccaattaaatttctgaattaatacttaaagtcacattacaa 1279
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 782 aaaaaagtcttataatgttccaattaaatttctgaattaatacttaaagtcacattacat 841
Query: 1280 cttatcaatatattctttgtattaaatagaacatgttttggtttttcataattggaacca 1339
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 842 tttatcaatatattctttgtattaaatagaacatgttttggtttttcataattggaacca 901
Query: 1340 tttttttttt-aataatatataagcaaagag 1369
|||||||||| ||||||||||||||||||||
Sbjct: 902 ttttttttttaaataatatataagcaaagag 932
Database: est
Posted date: Jul 14, 2011 2:25 PM
Number of letters in database: 8,280,457
Number of sequences in database: 9484
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.37 0.711 1.31
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Sequences: 9484
Number of Hits to DB: 247,600
Number of extensions: 6128
Number of successful extensions: 6128
Number of sequences better than 1.0e-10: 1
Number of HSP's gapped: 6124
Number of HSP's successfully gapped: 1
Length of query: 1369
Length of database: 8,280,457
Length adjustment: 17
Effective length of query: 1352
Effective length of database: 8,119,229
Effective search space: 10977197608
Effective search space used: 10977197608
X1: 11 (21.8 bits)
X2: 15 (29.7 bits)
X3: 50 (99.1 bits)
S1: 12 (24.3 bits)
S2: 34 (67.9 bits)