BLASTN 2.2.24 [Aug-08-2010]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= DPGLEAN05170 (UTR included)
(2242 letters)
Database: est
9484 sequences; 8,280,457 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
BF14_335_C4 182 2e-45
BF01043B1E03 129 2e-29
BF14_335_C2 127 8e-29
BF01019A1H08 123 1e-27
BF14_335_C5 123 1e-27
BF01016B1E06 117 8e-26
BF01049B1F01 109 2e-23
BF01056B2D01 84 1e-15
BF01016A2B02 76 3e-13
BF01014B2F02 74 1e-12
BF01045B1A06 74 1e-12
BF01055B2A04 70 2e-11
BF01017A1F03 70 2e-11
BF01021A2B11 68 7e-11
>BF14_335_C4
Length = 1491
Score = 182 bits (92), Expect = 2e-45
Identities = 180/208 (86%), Gaps = 1/208 (0%)
Strand = Plus / Plus
Query: 70 gcagccctagtaggctcgtttcaaaattggttaggtagagagaggagcttggacagtgga 129
|||||||||| ||| ||| |||| | ||||||||||||||||||||||||||| ||| ||
Sbjct: 1158 gcagccctagcaggatcgattcatatttggttaggtagagagaggagcttggaaagttga 1217
Query: 130 agtgaacgtttaatgcgcgttagataggggtcccttaaacttacgcctgggtcgcaagtc 189
|||| |||||||||||||| ||||| || ||||||||| ||| |||||||||||||||
Sbjct: 1218 ggtgagcgtttaatgcgcgtaagataaaggccccttaaacctacacctgggtcgcaagtc 1277
Query: 190 ccaggcactattgaagctcctctacctgcaacgcaatggacccggcacccacagggttaa 249
||||||||| ||||||||||||| |||||||||| |||| ||| ||| || || ||| ||
Sbjct: 1278 ccaggcactgttgaagctcctct-cctgcaacgcgatggtccccgcaaccgcacggtgaa 1336
Query: 250 tccatgaaatgttgtgaggtttcgtctc 277
|||||| |||| || ||| |||||||||
Sbjct: 1337 tccatggaatgctgagagttttcgtctc 1364
>BF01043B1E03
Length = 830
Score = 129 bits (65), Expect = 2e-29
Identities = 131/152 (86%), Gaps = 2/152 (1%)
Strand = Plus / Plus
Query: 87 gtttcaaaattggttaggtagagagaggagcttggacagtggaagtgaacgtttaatgcg 146
|||||||| |||||||||||||||||||| ||||||||||||| |||| | |||| |||
Sbjct: 319 gtttcaaatttggttaggtagagagaggaccttggacagtggaggtgagcacttaacgcg 378
Query: 147 cgttagataggggtcccttaaacttacgcctgggtcgcaagtcccaggcactattgaagc 206
||||||||||||| || |||||| || ||||||| |||||||||| ||||||||| | |
Sbjct: 379 cgttagataggggccctttaaacctatacctgggttgcaagtcccaagcactattggacc 438
Query: 207 tcctctacctgcaacgcaatggacccggcacc 238
|||||| || |||||| ||||||||| ||||
Sbjct: 439 tcctctcccagcaacg--atggacccgtcacc 468
>BF14_335_C2
Length = 1827
Score = 127 bits (64), Expect = 8e-29
Identities = 224/273 (82%), Gaps = 7/273 (2%)
Strand = Plus / Minus
Query: 9 ctaaaagacttagacctatcaagaactaacatcagttcattcttgtaacgtgcagcagaa 68
|||||| |||| | ||| || |||||||||| |||||||||||| ||||| | | |||
Sbjct: 1073 ctaaaatacttgggcctgtccagaactaacaccagttcattcttcgaacgtacttc-gaa 1015
Query: 69 agcagccctagtaggctcgtttcaaaattggttaggtagagagaggagcttggacagtgg 128
|||| |||||||| |||||||||| ||||||||| |||||||||||||||| ||||
Sbjct: 1014 gacagctctagtaggttcgtttcaaatttggttagg---agagaggagcttggacggtgg 958
Query: 129 aagtgaacgtttaatgcgcg--ttagataggggtcccttaaacttacgcctgggtcgcaa 186
| |||| |||| | |||| ||||||||||| | ||||||| ||| |||| |||||||
Sbjct: 957 aggtgagcgttatgtacgcgagttagatagggg-ctcttaaacctacacctgtgtcgcaa 899
Query: 187 gtcccaggcactattgaagctcctctacctgcaacgcaatggacccggcacccacagggt 246
||||||||||| ||||||||||||| |||||||||| ||||||||||||| || |||
Sbjct: 898 atcccaggcactgttgaagctcctctccctgcaacgcggcggacccggcacccgcacggt 839
Query: 247 taatccatgaaatgttgtgaggtttcgtctctt 279
||||||| || | | |||||||||||||||
Sbjct: 838 gaatccatagaaagctaagaggtttcgtctctt 806
>BF01019A1H08
Length = 504
Score = 123 bits (62), Expect = 1e-27
Identities = 95/106 (89%)
Strand = Plus / Minus
Query: 149 ttagataggggtcccttaaacttacgcctgggtcgcaagtcccaggcactattgaagctc 208
||||||||| | ||||||||| ||| |||||||||||| ||||||||||| |||||||||
Sbjct: 492 ttagataggagccccttaaacctacacctgggtcgcaactcccaggcactgttgaagctc 433
Query: 209 ctctacctgcaacgcaatggacccggcacccacagggttaatccat 254
|||| |||||||||| ||||||||||||||| || ||| |||||||
Sbjct: 432 ctctccctgcaacgcgatggacccggcacccgcacggtgaatccat 387
>BF14_335_C5
Length = 1597
Score = 123 bits (62), Expect = 1e-27
Identities = 129/152 (84%), Gaps = 2/152 (1%)
Strand = Plus / Plus
Query: 102 aggtagagagaggagcttggacagtggaagtgaacgtttaatgcgcgttagataggggtc 161
|||||||||||||||||||||| ||||| |||| |||||||||||||||||| |||||
Sbjct: 1438 aggtagagagaggagcttggacggtggaggtgagcgtttaatgcgcgttagacaggggcg 1497
Query: 162 ccttaaacttacgcctgggtcgcaagtcccaggcactattgaagctcctctacctgcaac 221
|||||||| ||| | |||||||||||||||||| ||||||||||||| | |||||
Sbjct: 1498 ccttaaacctacacnnnnntcgcaagtcccaggcactgttgaagctcctctccgtgcaaa 1557
Query: 222 gcaatggacccggcacccacagggttaatcca 253
| ||| ||||||||||| || ||| ||||||
Sbjct: 1558 g--atgcacccggcacccgcacggtgaatcca 1587
>BF01016B1E06
Length = 606
Score = 117 bits (59), Expect = 8e-26
Identities = 117/134 (87%), Gaps = 3/134 (2%)
Strand = Plus / Minus
Query: 88 tttcaaaattggttaggtagagagaggagcttggacagtggaagtgaacgtttaatgcgc 147
||||||| ||||||||||||||||||||| |||||| ||||| |||| ||||||| |||
Sbjct: 323 tttcaaatttggttaggtagagagaggagattggacggtggaggtgagcgtttaa--cgc 266
Query: 148 gttagataggggtcccttaaacttacgcctgggtcgcaagtcccaggcactattgaagct 207
|||||||| ||| ||||||||| ||| |||||||||| | |||| |||||| ||||||||
Sbjct: 265 gttagata-gggccccttaaacctacacctgggtcgctactccccggcactgttgaagct 207
Query: 208 cctctacctgcaac 221
||||| |||||||
Sbjct: 206 cctctctctgcaac 193
>BF01049B1F01
Length = 840
Score = 109 bits (55), Expect = 2e-23
Identities = 107/123 (86%), Gaps = 1/123 (0%)
Strand = Plus / Minus
Query: 100 ttaggtagagagaggagcttggacagtggaagtgaacgtttaatgcgcgttagatagggg 159
|||||||||||||||||||||||| || || ||| |||||| | | |||||||||||
Sbjct: 708 ttaggtagagagaggagcttggacggtagaggtgggtgtttaacgggagttagatagggc 649
Query: 160 tcccttaaacttacgcctgggtcgcaagtcccaggcactattgaagctcctctacctgca 219
|||||| || ||| |||||||||||||||||||||||| ||||||||||||| ||||||
Sbjct: 648 -cccttacacctacacctgggtcgcaagtcccaggcactgttgaagctcctctccctgca 590
Query: 220 acg 222
|||
Sbjct: 589 acg 587
>BF01056B2D01
Length = 728
Score = 83.8 bits (42), Expect = 1e-15
Identities = 78/90 (86%)
Strand = Plus / Minus
Query: 187 gtcccaggcactattgaagctcctctacctgcaacgcaatggacccggcacccacagggt 246
||||||||| || ||||||||||||| ||||||| | ||||||||||||||| || |||
Sbjct: 166 gtcccaggcgctgttgaagctcctctccctgcaatgtgatggacccggcacccgcacggt 107
Query: 247 taatccatgaaatgttgtgaggtttcgtct 276
||| |||| ||||||| ||||||||||||
Sbjct: 106 gaattcatggaatgttgagaggtttcgtct 77
>BF01016A2B02
Length = 780
Score = 75.8 bits (38), Expect = 3e-13
Identities = 77/90 (85%)
Strand = Plus / Minus
Query: 148 gttagataggggtcccttaaacttacgcctgggtcgcaagtcccaggcactattgaagct 207
|||||||||||| | ||||| | ||| |||| ||||||| ||||||||||| ||||||||
Sbjct: 298 gttagataggggcctcttaagcctacacctgagtcgcaattcccaggcactgttgaagct 239
Query: 208 cctctacctgcaacgcaatggacccggcac 237
||||| ||| |||||| |||||||||||
Sbjct: 238 cctctcccttcaacgcgcgggacccggcac 209
>BF01014B2F02
Length = 623
Score = 73.8 bits (37), Expect = 1e-12
Identities = 88/104 (84%), Gaps = 2/104 (1%)
Strand = Plus / Minus
Query: 175 cctgggtcgcaagtcccaggcactattgaagctcctctacctgcaacgcaatggacccgg 234
|||||||||||||||| |||| || |||||||||||| |||||||||| |||||||||
Sbjct: 619 cctgggtcgcaagtcctaggcgctgctgaagctcctctccctgcaacgc--tggacccgg 562
Query: 235 cacccacagggttaatccatgaaatgttgtgaggtttcgtctct 278
||||| || ||| ||||| |||| || ||||||||||||||
Sbjct: 561 cacccgcacggtgcatccactgaatgctgagaggtttcgtctct 518
>BF01045B1A06
Length = 820
Score = 73.8 bits (37), Expect = 1e-12
Identities = 61/69 (88%)
Strand = Plus / Minus
Query: 184 caagtcccaggcactattgaagctcctctacctgcaacgcaatggacccggcacccacag 243
||||||| ||||||| ||||||||||||| |||||||| |||||||||| |||||| ||
Sbjct: 748 caagtccaaggcactgttgaagctcctctccctgcaacacaatggaccccgcacccgcat 689
Query: 244 ggttaatcc 252
||| |||||
Sbjct: 688 ggtgaatcc 680
>BF01055B2A04
Length = 830
Score = 69.9 bits (35), Expect = 2e-11
Identities = 125/155 (80%)
Strand = Plus / Minus
Query: 85 tcgtttcaaaattggttaggtagagagaggagcttggacagtggaagtgaacgtttaatg 144
|||| ||| |||||| |||||||||||||| | | || || ||||||| ||| ||| |
Sbjct: 324 tcgtatcataattggggaggtagagagaggaacgtcgaaggttgaagtgagcgtataacg 265
Query: 145 cgcgttagataggggtcccttaaacttacgcctgggtcgcaagtcccaggcactattgaa 204
|||||||||| |||| |||||||||||| ||||||| |||| | ||||| | || ||
Sbjct: 264 cgcgttagatgggggctccttaaacttacacctgggtagcaaattataggcagttttaaa 205
Query: 205 gctcctctacctgcaacgcaatggacccggcaccc 239
|| ||||| |||||||||| |||||| |||||||
Sbjct: 204 gcccctctccctgcaacgcgatggacttggcaccc 170
>BF01017A1F03
Length = 782
Score = 69.9 bits (35), Expect = 2e-11
Identities = 99/118 (83%), Gaps = 3/118 (2%)
Strand = Plus / Plus
Query: 70 gcagccctagtaggctcgtttcaaaattggttaggtagagagaggagcttggacagtgga 129
|||||||||||| | ||||| || |||||||| ||||||||||||||| || |||||
Sbjct: 173 gcagccctagtacattagtttctaagttggttagatagagagaggagcttccacggtgga 232
Query: 130 agtgaacgtttaatgcgcgttagataggggtcccttaaacttacgcctgggtcgcaag 187
|||| ||||||| |||| ||||||| |||||| ||||| ||| |||||||||||||
Sbjct: 233 ggtgagcgtttaacgcgcattagata--ggtccc-taaacctacacctgggtcgcaag 287
>BF01021A2B11
Length = 729
Score = 67.9 bits (34), Expect = 7e-11
Identities = 76/90 (84%)
Strand = Plus / Plus
Query: 108 agagaggagcttggacagtggaagtgaacgtttaatgcgcgttagataggggtcccttaa 167
|||||||||||||||| ||||| |||| ||||||| ||| ||||||| |||| |||| |
Sbjct: 373 agagaggagcttggacggtggaggtgagcgtttaacgcgtgttagatcggggcgccttca 432
Query: 168 acttacgcctgggtcgcaagtcccaggcac 197
|| ||| ||||||| | ||||||||||||
Sbjct: 433 acctacacctgggtgcccagtcccaggcac 462
Database: est
Posted date: Jul 14, 2011 2:25 PM
Number of letters in database: 8,280,457
Number of sequences in database: 9484
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.37 0.711 1.31
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Sequences: 9484
Number of Hits to DB: 300,278
Number of extensions: 6839
Number of successful extensions: 6839
Number of sequences better than 1.0e-10: 14
Number of HSP's gapped: 6830
Number of HSP's successfully gapped: 14
Length of query: 2242
Length of database: 8,280,457
Length adjustment: 17
Effective length of query: 2225
Effective length of database: 8,119,229
Effective search space: 18065284525
Effective search space used: 18065284525
X1: 11 (21.8 bits)
X2: 15 (29.7 bits)
X3: 50 (99.1 bits)
S1: 12 (24.3 bits)
S2: 34 (67.9 bits)