BLASTN 2.2.24 [Aug-08-2010]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= DPGLEAN05194 (UTR included)
(1345 letters)
Database: est
9484 sequences; 8,280,457 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
BF14_1058_C1 706 0.0
>BF14_1058_C1
Length = 1980
Score = 706 bits (356), Expect = 0.0
Identities = 359/360 (99%)
Strand = Plus / Plus
Query: 513 gcagtggacctgaccaacggccaactcacaccgaataacaacacaccgctgctcgcgcaa 572
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 500 gcagtggacctgaccaacggccaactcacaccgaataacaacacaccgctgctcgcgcaa 559
Query: 573 gcgctttcagttatgaacaactaccaagcagccgcggctgggtatgggccaccagcttcg 632
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 560 gcgctttcagttatgaacaactaccaagcagccgcggctgggtatgggccaccagcttcg 619
Query: 633 ccgcacacggctggaggacgggctggattccctgccgccagctcgccaggacctgcgctg 692
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 620 ccgcacacggctggaggacgggctggattccctgccgccagctcgccaggacctgcgctg 679
Query: 693 gacgtgtacggctccgcagcggacagcgttggctacgtgcaggcagccagccctcagcct 752
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 680 gacgtgtacggctccgcagcggacagcgttggctacgtgcaggcagccagccctcagcct 739
Query: 753 tctggatttcccgctatcgccgtcagccgtgcaccccttaattataccccaggaccattg 812
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 740 tctggatttcccgctatcgccgtcagccgtgcaccccttaattataccccaggaccattg 799
Query: 813 attcctgcggctttcaccaacggttaccattgaaagtgttatagcacaaatattaaacgt 872
||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 800 attcctgcggccttcaccaacggttaccattgaaagtgttatagcacaaatattaaacgt 859
Score = 289 bits (146), Expect = 6e-78
Identities = 146/146 (100%)
Strand = Plus / Plus
Query: 1200 gtggcgagcggcgtggcggcgcgtgacaatgcatcaataacagcaagaagaccatcatca 1259
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 858 gtggcgagcggcgtggcggcgcgtgacaatgcatcaataacagcaagaagaccatcatca 917
Query: 1260 gcaaggctttaccatcgtctgcaaaccgcttccacgcacgccgcgccacgcgccttcgac 1319
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 918 gcaaggctttaccatcgtctgcaaaccgcttccacgcacgccgcgccacgcgccttcgac 977
Query: 1320 ggtcgtctactccgtccgaccaccgc 1345
||||||||||||||||||||||||||
Sbjct: 978 ggtcgtctactccgtccgaccaccgc 1003
Database: est
Posted date: Jul 14, 2011 2:25 PM
Number of letters in database: 8,280,457
Number of sequences in database: 9484
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.37 0.711 1.31
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Sequences: 9484
Number of Hits to DB: 157,498
Number of extensions: 2942
Number of successful extensions: 2942
Number of sequences better than 1.0e-10: 1
Number of HSP's gapped: 2942
Number of HSP's successfully gapped: 2
Length of query: 1345
Length of database: 8,280,457
Length adjustment: 17
Effective length of query: 1328
Effective length of database: 8,119,229
Effective search space: 10782336112
Effective search space used: 10782336112
X1: 11 (21.8 bits)
X2: 15 (29.7 bits)
X3: 50 (99.1 bits)
S1: 12 (24.3 bits)
S2: 34 (67.9 bits)