BLASTN 2.2.24 [Aug-08-2010]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= DPGLEAN05204 (UTR included)
(4132 letters)
Database: est
9484 sequences; 8,280,457 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
BF01017B1A06 1273 0.0
BF14_335_C2 96 5e-19
BF01031B2E06 86 5e-16
>BF01017B1A06
Length = 665
Score = 1273 bits (642), Expect = 0.0
Identities = 661/666 (99%), Gaps = 1/666 (0%)
Strand = Plus / Plus
Query: 2251 ttgatatacagaggcgagatttattggatcaggtggtgagaatgcgtgctaatttccttc 2310
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1 ttgatatacagaggcgagatttattggatcaggtggtgagaatgcgtgctaatttccttc 60
Query: 2311 aaccgtcgttagcgcatacacgtttagtagatgaagatagtttacattcgatgcctgttg 2370
||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||
Sbjct: 61 aaccgtcgttagcgcatacacgtttagtagatgaagatagtttacattcaatgcctgttg 120
Query: 2371 ctcaaatgggtaattaccaggaatatctaaaacgtatgacgccgcagttacgagagatcg 2430
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 121 ctcaaatgggtaattaccaggaatatctaaaacgtatgacgccgcagttacgagagatcg 180
Query: 2431 aatcgcagcccgtgaggcaacatatgttcggaaatccatttaagatagataagcgcatga 2490
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 181 aatcgcagcccgtgaggcaacatatgttcggaaatccatttaagatagataagcgcatga 240
Query: 2491 tggtggacgaggcggacatagatcccttgggtgcggtgcggggctccgctggcggcggtg 2550
|||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||
Sbjct: 241 tggtggacgaggcggacatagatcccttgggtgctgtgcggggctccgctggcggcggtg 300
Query: 2551 tcggtggtaagcgggggacggagagcccacgggcggtgccgcccaaaaggaaggcaggac 2610
||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 301 tcggtggtaagagggggacggagagcccacgggcggtgccgcccaaaaggaaggcaggac 360
Query: 2611 ccataccgcaccacgtagtggcgaggcggccgtccacaccgacggtgatcacacagccgc 2670
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 361 ccataccgcaccacgtagtggcgaggcggccgtccacaccgacggtgatcacacagccgc 420
Query: 2671 tgtcacctcagccgccattaacaccgccgcccgccgctccactgtcgcctgtgacgtcac 2730
||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||
Sbjct: 421 tgtcacctcagccgccactaacaccgccgcccgccgctccactgtcgcctgtgacgtcac 480
Query: 2731 gtagaccggcatcaccactggcgccggtaccgtcggacctaccgtcagggagaccacctg 2790
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 481 gtagaccggcatcaccactggcgccggtaccgtcggacctaccgtcagggagaccacctg 540
Query: 2791 aggagcctccctgcccggacggcggtccgccctctccggcaccaccgccagccgcgcccg 2850
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 541 aggagcctccctgcccggacggcggtccgccctctccggcaccaccgccagccgcgcccg 600
Query: 2851 caaatctaccaccagttgtcaagccttttcttaatggagatgcctatactacgatgggta 2910
| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 601 c-aatctaccaccagttgtcaagccttttcttaatggagatgcctatactacgatgggta 659
Query: 2911 aaatgc 2916
||||||
Sbjct: 660 aaatgc 665
>BF14_335_C2
Length = 1827
Score = 95.6 bits (48), Expect = 5e-19
Identities = 177/219 (80%), Gaps = 7/219 (3%)
Strand = Plus / Minus
Query: 3078 acgggtccttgggaaaccaacatcccaaaagaccctgacgtcaaggtcaacaagcattac 3137
|||| ||||||| | ||||||||||| ||| ||| || | |||||||||||||| ||||
Sbjct: 1227 acggttccttggaagaccaacatccccaaaaaccatgccatcaaggtcaacaagtattat 1168
Query: 3138 gaactcactaagaatgggttcgttgtaaa-tttatacgcgttagaagtaggagttag--- 3193
|| ||||||| |||| ||||||| |||| ||| |||| | ||||||| |||| ||
Sbjct: 1167 gagctcactaggaataggttcgtaataaaatttgtacgtggtagaagtgggagaaagtga 1108
Query: 3194 ---aggtaaaaccgccaaatctctctacagcttactaaaagtcttgggcctgtcaagaat 3250
||||| ||| || ||||||||||||||| |||||||| |||||||||||| ||||
Sbjct: 1107 gagaggtataacagctaaatctctctacagcctactaaaatacttgggcctgtccagaac 1048
Query: 3251 taacatcaattcattcttggaacgtgcgtcgaaggcagc 3289
||||| || ||||||||| |||||| | |||||| ||||
Sbjct: 1047 taacaccagttcattcttcgaacgtacttcgaagacagc 1009
>BF01031B2E06
Length = 707
Score = 85.7 bits (43), Expect = 5e-16
Identities = 140/171 (81%), Gaps = 1/171 (0%)
Strand = Plus / Plus
Query: 3090 gaaaccaacatcccaaaagaccctgacgtcaaggtcaacaagcattacgaa-ctcactaa 3148
|||||||||||||| ||||||| || | ||||| |||| ||| |||||||| ||||||||
Sbjct: 436 gaaaccaacatccccaaagaccatgccatcaagatcaataagtattacgaagctcactaa 495
Query: 3149 gaatgggttcgttgtaaatttatacgcgttagaagtaggagttagaggtaaaaccgccaa 3208
|||| ||||||| | |||||| |||||| ||||||| |||| || | | || || ||
Sbjct: 496 gaataggttcgtggcaaatttgtacgcggtagaagtgggagcgagcgttgtaaaagctaa 555
Query: 3209 atctctctacagcttactaaaagtcttgggcctgtcaagaattaacatcaa 3259
||||||| ||| | |||||||| |||||||||||| ||| |||||||||
Sbjct: 556 atctctccacaacctactaaaaaccttgggcctgtccagatctaacatcaa 606
Database: est
Posted date: Jul 14, 2011 2:25 PM
Number of letters in database: 8,280,457
Number of sequences in database: 9484
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.37 0.711 1.31
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Sequences: 9484
Number of Hits to DB: 411,004
Number of extensions: 7378
Number of successful extensions: 7378
Number of sequences better than 1.0e-10: 3
Number of HSP's gapped: 7376
Number of HSP's successfully gapped: 3
Length of query: 4132
Length of database: 8,280,457
Length adjustment: 18
Effective length of query: 4114
Effective length of database: 8,109,745
Effective search space: 33363490930
Effective search space used: 33363490930
X1: 11 (21.8 bits)
X2: 15 (29.7 bits)
X3: 50 (99.1 bits)
S1: 12 (24.3 bits)
S2: 35 (69.9 bits)