BLASTN 2.2.24 [Aug-08-2010]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= DPGLEAN05224 (UTR included)
(2161 letters)
Database: est
9484 sequences; 8,280,457 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
BF01054B1D06 1564 0.0
BF01050A2F07 971 0.0
>BF01054B1D06
Length = 836
Score = 1564 bits (789), Expect = 0.0
Identities = 814/821 (99%), Gaps = 1/821 (0%)
Strand = Plus / Plus
Query: 340 aagatattttaagtatggctacaactgaaaagcaatatttcggtcctttaacattacatc 399
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 17 aagatattttaagtatggctacaactgaaaagcaatatttcggtcctttaacattacatc 76
Query: 400 aaaaaatcgaaaagccttcaatatttaagtgtggcaagtcagtggaatgttcttgtgtta 459
||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 77 aaaaaattgaaaagccttcaatatttaagtgtggcaagtcagtggaatgttcttgtgtta 136
Query: 460 tgtgcgatgaaatcttcatgttaccaatgtctgagaaacagatgctcacccatttgttta 519
||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||
Sbjct: 137 tgtgcgatgaaatcttcatgttaccaacgtctgagaaacagatgctcacccatttgttta 196
Query: 520 tgaaacatcgtctggtaatagctgatgtaaatcaaatagcagatttacaagcttacatga 579
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 197 tgaaacatcgtctggtaatagctgatgtaaatcaaatagcagatttacaagcttacatga 256
Query: 580 agtattggaaattaagatttaaagatagtaaccttccatatttttgcactacaatgcttc 639
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
Sbjct: 257 agtattggaaattaagatttaaagatagtaaccttccatatttttgcactacaatgctcc 316
Query: 640 ttgatacaaaaccagatggaacgaaatcaaaaaatgaggaatacttcttgttaagtgatg 699
|||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||
Sbjct: 317 ttgatacaaaaccagatggaacaaaatcaaaaaatgaggaatacttcttgttaagtgatg 376
Query: 700 ttttacctgaggataaagaactgcgtgtcaacattagacagaggagattagaggaattac 759
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 377 ttttacctgaggataaagaactgcgtgtcaacattagacagaggagattagaggaattac 436
Query: 760 ttgaaagacatgcttttgagagagaagataaaaattatatcaaggaatgccttttctgca 819
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 437 ttgaaagacatgcttttgagagagaagataaaaattatatcaaggaatgccttttctgca 496
Query: 820 ggcttgtttctaatgataccagagctaactatttgaatcatctgtatgaaaaacacaact 879
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 497 ggcttgtttctaatgataccagagctaactatttgaatcatctgtatgaaaaacacaact 556
Query: 880 tccacattgctaaacctgaaaatttgatttttatagatgatcttgtcaatttgatcgcta 939
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 557 tccacattgctaaacctgaaaatttgatttttatagatgatcttgtcaatttgatcgcta 616
Query: 940 ataaattggaaaaacttcaatgtattttttgtgaaggtgtatttaaagatcggacgatat 999
|||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||
Sbjct: 617 ataaattggaaaaacttcaatgtattttttgtgaaggtgtgtttaaagatcggacgatat 676
Query: 1000 taaaagagcacatgcgtaaaaagggacataagagaattaaccctgttaataaagaatatg 1059
||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||
Sbjct: 677 taaaagagcacatgcgtaaaaagggacataagagaattaaccctgttaataaagactatg 736
Query: 1060 ataaattctttttagtgaattatattggtgataaggagaccgttcctaagaagcaataca 1119
|| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 737 at-aattctttttagtgaattatattggtgataaggagaccgttcctaagaagcaataca 795
Query: 1120 ttaagcctcatagtgttaagtcatctaatgtggcacataaa 1160
|||||||||||||||||||||||||||||||||||||||||
Sbjct: 796 ttaagcctcatagtgttaagtcatctaatgtggcacataaa 836
>BF01050A2F07
Length = 616
Score = 971 bits (490), Expect = 0.0
Identities = 560/586 (95%), Gaps = 23/586 (3%)
Strand = Plus / Plus
Query: 1357 taaaaatagttaattacatcagacgtcagatgcatttacggcaatgcttgtcgtgtgaga 1416
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 35 taaaaatagttaattacatcagacgtcagatgcatttacggcaatgcttgtcgtgtgaga 94
Query: 1417 caaagtttcatgatgttaagaacctggagaaacacataaaggagacaaaacactttgtat 1476
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 95 caaagtttcatgatgttaagaacctggagaaacacataaaggagacaaaacactttgtat 154
Query: 1477 tgaagaaggaaaaatgggaccagccggaatattatttccctacgtatgaggatgatttat 1536
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 155 tgaagaaggaaaaatgggaccagccggaatattatttccctacgtatgaggatgatttat 214
Query: 1537 ttctttgcttcatacacgatgacaatgagagctggtggtcaagcgatgaacatgagtcgg 1596
|||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||
Sbjct: 215 ttctttgcttcatacacgatgacaatgagagctggtggtcaagcgacgaacatgagtcgg 274
Query: 1597 aaaaccagaatactatgtctgatagcatttctaaagaaatggcgttagccgttctaagtg 1656
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 275 aaaaccagaatactatgtctgatagcatttctaaagaaatggcgttagccgttctaagtg 334
Query: 1657 aataatgttcaaagcaatatataaattgtgtaacttccatttaaagcaatcattgttttt 1716
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 335 aataatgttcaaagcaatatataaattgtgtaacttccatttaaagcaatcattgttttt 394
Query: 1717 atattacaaaaattatgtatcattaagtatttgtt--agtcttgatctatatgactgcaa 1774
||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||
Sbjct: 395 atattacaaaaattatgtatcattaagtatttgttaaagtcttgatctatatgactgcaa 454
Query: 1775 tatatttttatcacagtgattttaataatttttgtgtaatgcctaac------------- 1821
|||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 455 tatatttttatcacagtgattttaataatttttgtgtaatgcctaactaatatatatata 514
Query: 1822 ----tatatatatataattataaaatataacaaacatgtttataaaatctatatataatt 1877
||||||||||||||| ||||||||||||||||||||||||||||||||||| ||||
Sbjct: 515 tatatatatatatataattttaaaatataacaaacatgtttataaaatctatatacaatt 574
Query: 1878 atagttaaatatatatatatattttgttattggatgttgccatgac 1923
|||||||| ||||||||||||||||||||||||||||||||||
Sbjct: 575 atagttaa----atatatatattttgttattggatgttgccatgac 616
Database: est
Posted date: Jul 14, 2011 2:25 PM
Number of letters in database: 8,280,457
Number of sequences in database: 9484
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.37 0.711 1.31
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Sequences: 9484
Number of Hits to DB: 379,410
Number of extensions: 17106
Number of successful extensions: 17106
Number of sequences better than 1.0e-10: 2
Number of HSP's gapped: 17103
Number of HSP's successfully gapped: 3
Length of query: 2161
Length of database: 8,280,457
Length adjustment: 17
Effective length of query: 2144
Effective length of database: 8,119,229
Effective search space: 17407626976
Effective search space used: 17407626976
X1: 11 (21.8 bits)
X2: 15 (29.7 bits)
X3: 50 (99.1 bits)
S1: 12 (24.3 bits)
S2: 34 (67.9 bits)