BLASTN 2.2.24 [Aug-08-2010]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= DPGLEAN05236 (UTR included)
(2610 letters)
Database: est
9484 sequences; 8,280,457 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
BF01019B1G10 92 5e-18
BF01012A1B09 84 1e-15
BF14_729_C3 82 5e-15
BF01021B1F09 78 8e-14
BF01029B1H01 72 5e-12
BF01011A1H06 68 8e-11
BF14_729_C2 68 8e-11
>BF01019B1G10
Length = 488
Score = 91.7 bits (46), Expect = 5e-18
Identities = 78/86 (90%), Gaps = 2/86 (2%)
Strand = Plus / Minus
Query: 293 aaagtaaccgaaacgtcgggagtatgtagttttttaaaataataaaatgcgcgtagtata 352
|||| |||||||||||||||| |||||||| ||||||||||||||||| ||||||||| |
Sbjct: 374 aaaggaaccgaaacgtcgggattatgtagt-ttttaaaataataaaattcgcgtagta-a 317
Query: 353 aaccgaaaaatattagttttatttta 378
| |||||||||||| ||||||||||
Sbjct: 316 atgcgaaaaatattacttttatttta 291
>BF01012A1B09
Length = 841
Score = 83.8 bits (42), Expect = 1e-15
Identities = 79/89 (88%), Gaps = 3/89 (3%)
Strand = Plus / Minus
Query: 293 aaagtaaccgaaacgtcgggagtatgtagttttttaaaataataaaatgcgcgtagtata 352
||||||||||||||||||||| ||||||| ||||||||||||||||| |||||||| |
Sbjct: 820 aaagtaaccgaaacgtcgggattatgtag--ttttaaaataataaaatccgcgtagtgt- 764
Query: 353 aaccgaaaaatattagttttattttaatg 381
| |||||| |||||||||| |||| ||||
Sbjct: 763 atccgaaatatattagtttcatttaaatg 735
>BF14_729_C3
Length = 2041
Score = 81.8 bits (41), Expect = 5e-15
Identities = 56/60 (93%), Gaps = 2/60 (3%)
Strand = Plus / Plus
Query: 293 aaagtaaccgaaacgtcgggagtatgtagttttttaaaataataaaatgcgcgtagtata 352
||||||||||||||||||||| |||||||||||| |||||||||||| |||||||||||
Sbjct: 1617 aaagtaaccgaaacgtcgggattatgtagttttt--aaataataaaatccgcgtagtata 1674
>BF01021B1F09
Length = 792
Score = 77.8 bits (39), Expect = 8e-14
Identities = 70/79 (88%), Gaps = 1/79 (1%)
Strand = Plus / Minus
Query: 291 ttaaagtaaccgaaacgtcgggagtatgtagttttttaaaataataaaatgcgcgtagta 350
||||||||||||||||| |||||| | ||||||||| ||||||||||||| ||||||||
Sbjct: 686 ttaaagtaaccgaaacgacgggagcacgtagttttt-aaaataataaaatacgcgtagtg 628
Query: 351 taaaccgaaaaatattagt 369
||| |||||||| |||||
Sbjct: 627 taatgcgaaaaatcttagt 609
>BF01029B1H01
Length = 700
Score = 71.9 bits (36), Expect = 5e-12
Identities = 54/59 (91%), Gaps = 2/59 (3%)
Strand = Plus / Plus
Query: 292 taaagtaaccgaaacgtcgggagtatgtagttttttaaaataataaaatgcgcgtagta 350
|||||||||||||||||||| ||||| | ||||||||||||||||||| |||||||||
Sbjct: 639 taaagtaaccgaaacgtcggcagtat--aattttttaaaataataaaatacgcgtagta 695
>BF01011A1H06
Length = 739
Score = 67.9 bits (34), Expect = 8e-11
Identities = 43/46 (93%)
Strand = Plus / Plus
Query: 293 aaagtaaccgaaacgtcgggagtatgtagttttttaaaataataaa 338
|||||||||||||||||||||||||||||| ||||| || ||||||
Sbjct: 489 aaagtaaccgaaacgtcgggagtatgtagtcttttacaaaaataaa 534
>BF14_729_C2
Length = 1289
Score = 67.9 bits (34), Expect = 8e-11
Identities = 34/34 (100%)
Strand = Plus / Plus
Query: 293 aaagtaaccgaaacgtcgggagtatgtagttttt 326
||||||||||||||||||||||||||||||||||
Sbjct: 557 aaagtaaccgaaacgtcgggagtatgtagttttt 590
Database: est
Posted date: Jul 14, 2011 2:25 PM
Number of letters in database: 8,280,457
Number of sequences in database: 9484
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.37 0.711 1.31
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Sequences: 9484
Number of Hits to DB: 216,382
Number of extensions: 4008
Number of successful extensions: 4008
Number of sequences better than 1.0e-10: 7
Number of HSP's gapped: 4002
Number of HSP's successfully gapped: 7
Length of query: 2610
Length of database: 8,280,457
Length adjustment: 17
Effective length of query: 2593
Effective length of database: 8,119,229
Effective search space: 21053160797
Effective search space used: 21053160797
X1: 11 (21.8 bits)
X2: 15 (29.7 bits)
X3: 50 (99.1 bits)
S1: 12 (24.3 bits)
S2: 34 (67.9 bits)