BLASTN 2.2.24 [Aug-08-2010]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= DPGLEAN05246 (UTR included)
(2122 letters)
Database: est
9484 sequences; 8,280,457 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
BF01019B2G11 1320 0.0
BF14_959_C1 313 6e-85
BF01029B1D10 274 5e-73
>BF01019B2G11
Length = 690
Score = 1320 bits (666), Expect = 0.0
Identities = 684/690 (99%)
Strand = Plus / Plus
Query: 397 acccggaacctaagtggcaggcacagctttttatcgaacgctataccatcattcagcaga 456
|||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1 acccggaaccaaagtggcaggcacagctttttatcgaacgctataccatcattcagcaga 60
Query: 457 gaacaacacgtaataaactatttgcgagagaggctttgccgtccatggaaaatgaaaatc 516
||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 61 gaacatcacgtaataaactatttgcgagagaggctttgccgtccatggaaaatgaaaatc 120
Query: 517 gttttcagttacgaactattgaggttttacagagttcttcaagtcgagtggatgaggtca 576
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 121 gttttcagttacgaactattgaggttttacagagttcttcaagtcgagtggatgaggtca 180
Query: 577 ttgttctgggtcttataacacaattgacggagggtaaatattatttggaggacccaaccg 636
||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 181 ttgttttgggtcttataacacaattgacggagggtaaatattatttggaggacccaaccg 240
Query: 637 gcagcgttcctttagatatgagtcaaactcgctatcattccggtttgtttactgagagta 696
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 241 gcagcgttcctttagatatgagtcaaactcgctatcattccggtttgtttactgagagta 300
Query: 697 gttttgtcttagctgagggttattacgatgataaagttttacatgtaatgggtcttgtgc 756
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 301 gttttgtcttagctgagggttattacgatgataaagttttacatgtaatgggtcttgtgc 360
Query: 757 taccaccttctgagacacgagaaacgtcattaccatattttggtaatttgaatacatttg 816
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 361 taccaccttctgagacacgagaaacgtcattaccatattttggtaatttgaatacatttg 420
Query: 817 gaggtatatcaaaaacattattgaagcattcaaaaaatttgtcaaaaattgaacaggaga 876
|||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||
Sbjct: 421 gaggtatatcaaaaactttattgaagcattcaaaaaatttgtcaaaaattgaacaggaga 480
Query: 877 atgaagatggtatgataatatttctatcggaggtttggtttgacaatataaaagtgatat 936
||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||
Sbjct: 481 atgaagatggtatgataatatttctatcggaagtttggtttgacaatataaaagtgatat 540
Query: 937 cgaagttaaaaacattattttctggctataatgattttcctcctatagccatagtgttta 996
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 541 cgaagttaaaaacattattttctggctataatgattttcctcctatagccatagtgttta 600
Query: 997 tgggtgaatttttatcttgtccatacggatacgagcatagcacacagttaaaagctgctc 1056
|||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||
Sbjct: 601 tgggtgaatttttatcttgtccatacggatacgagcatagcacacaattaaaagctgctc 660
Query: 1057 ttggtaacttgtgtgatatgattcttcctt 1086
||||||||||||||||||||||||||||||
Sbjct: 661 ttggtaacttgtgtgatatgattcttcctt 690
>BF14_959_C1
Length = 1196
Score = 313 bits (158), Expect = 6e-85
Identities = 161/162 (99%)
Strand = Plus / Plus
Query: 1898 ggtgtaagccggactggtgctatccaagtatgagtaaagaaacgaatgaattactaagac 1957
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 283 ggtgtaagccggactggtgctatccaagtatgagtaaagaaacgaatgaattactaagac 342
Query: 1958 agtgtgttgacttgccacaagttgaattaagtgatgacattgaagagattatcaaaaaga 2017
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 343 agtgtgttgacttgccacaagttgaattaagtgatgacattgaagagattatcaaaaaga 402
Query: 2018 gtaaagctttccccattccatttcccataaacacagtgaggt 2059
||||||||||||||||||||||||||||||||||||| ||||
Sbjct: 403 gtaaagctttccccattccatttcccataaacacagtaaggt 444
>BF01029B1D10
Length = 703
Score = 274 bits (138), Expect = 5e-73
Identities = 156/162 (96%)
Strand = Plus / Plus
Query: 1898 ggtgtaagccggactggtgctatccaagtatgagtaaagaaacgaatgaattactaagac 1957
|||||| |||||||||| | ||||| ||||||||||||||||||||||||||||||||||
Sbjct: 285 ggtgtaggccggactggagttatcccagtatgagtaaagaaacgaatgaattactaagac 344
Query: 1958 agtgtgttgacttgccacaagttgaattaagtgatgacattgaagagattatcaaaaaga 2017
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 345 agtgtgttgacttgccacaagttgaattaagtgatgacattgaagagattatcaaaaaga 404
Query: 2018 gtaaagctttccccattccatttcccataaacacagtgaggt 2059
||||| ||||||||||||||||||||||||||||||| ||||
Sbjct: 405 gtaaatctttccccattccatttcccataaacacagtaaggt 446
Database: est
Posted date: Jul 14, 2011 2:25 PM
Number of letters in database: 8,280,457
Number of sequences in database: 9484
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.37 0.711 1.31
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Sequences: 9484
Number of Hits to DB: 253,152
Number of extensions: 4677
Number of successful extensions: 4677
Number of sequences better than 1.0e-10: 3
Number of HSP's gapped: 4676
Number of HSP's successfully gapped: 3
Length of query: 2122
Length of database: 8,280,457
Length adjustment: 17
Effective length of query: 2105
Effective length of database: 8,119,229
Effective search space: 17090977045
Effective search space used: 17090977045
X1: 11 (21.8 bits)
X2: 15 (29.7 bits)
X3: 50 (99.1 bits)
S1: 12 (24.3 bits)
S2: 34 (67.9 bits)